FMO09416.5prime Sequence
1105 bp (985 high quality bases) assembled on 2010-10-13
> FMO09416.5prime
CAGTCGACATGCATCAGAATATATGGAGCGCGCCGCAGGTGGGTGGTTCT
GGTGGCGCTTTGAAGGCCTTGGCCAGGAATGTGGCCAATCATCTGAAGCT
GAACCGCAGCAATATGAAACGAGTGGTGGCCCAGGTGGTCGCCGAGCACC
ATACCCTCGGGGAGGTGGCCGACTACAAGGGTCACATGTACTTTGCCAAG
CCGGATCGCTTGAATTTTCACGAGCTGATTGCCCAGTCCAAGGAGGCCTT
CGATGATCTGTTGCTCCACGAACCGCGATCTGTGAAAAAGCAAGCAATCA
CGAAACGTTCCAAGCATCCGACCAATCCCAACGTTAAACTACAGATGACA
GTATCACCACCGCAATTAGAAAAACCACAAAAGAAACAATTAACTTTTAA
AAAGTCTGGTCTACCGAAAAAACATTCAAGGCCAAAAATTCGGAGTCGGA
AGAAGAGTTCCACCACCATTTTTCAGCTGGCGGATGCAGGTCGTCGTAGT
CTAAATGGTGTAATCATTGACGAAACTCATTTGCCCCTAGATGGTGAGCA
AAGGGAGATCCTTTTGCATGTGCCACCGTCGCTAGTCAAGCGGTCCCGAA
GGCGTCTCCGATCTGCCCAGATCAAGAATACATCGGAGAAATGCCCACCG
CAGAAACCGGATAAGGATCCCGATCAGAAGAAGACAGGATCACAACAGAA
GGATGGCGAGAAATTCACCGAGGAGAAGATTCTTCAAGTTCAAAAGCGTC
AACCCGAGAAGAAACGCAGCGAAGAACCGAAACCAGTAAAGAAAATTCAG
AAAACCACCAGAAAGAGCTGATTCGGTCACCTTCTCGCCCCCGATCGGGG
TCCTCTTCGGTTCCTCAGACCCGACGGTCTCCTTCACCAGTTCGTTCACA
AAACTGACATCTGTTCAGAAGCGAGCCAAGCTCTTGGCTCACCACCCCAC
AGACATTAATGTCAGAATCACGCATCAGGCGGGGAGACACCAAAATGCAA
CTTCCAGCCTTCGAAAGATCATCGAGATCGATGCTAGAACAGTCAGAAAA
ACTCATGCCGCAGAAGCTACGACAGGCTGGAATACTGAACGCTTCTAAAG
AGCCT
FMO09416.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:35:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11369-RA | 2478 | CG11369-RA | 309..1421 | 9..1099 | 4905 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:35:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7574598..7575593 | 9..997 | 4570 | 98.9 | Plus |
Blast to na_te.dros performed 2014-11-26 14:35:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6746..6864 | 285..403 | 117 | 57.5 | Plus |
FMO09416.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:02 Download gff for
FMO09416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11369-RA | 1..1108 | 9..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:37:30 Download gff for
FMO09416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11369-RA | 304..1416 | 1..1093 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:07 Download gff for
FMO09416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11369-RA | 304..1416 | 1..1093 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:07 Download gff for
FMO09416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7574593..7575705 | 1..1093 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:37:30 Download gff for
FMO09416.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7468626..7469738 | 1..1093 | 96 | | Plus |
