FMO09417.5prime Sequence
1111 bp (1019 high quality bases) assembled on 2010-10-13
> FMO09417.5prime
CAGTCGACATGTCTACCCTGGCCAATGGTGGAAAGGAGGAGGATCTAAAA
ATTCTGGCTCAGCTGAAGAGCATCGAACAGATCAACGAGCAGCGCCGCAT
ATTTCTCAACAGCACGATCAATGAGGAGGTGCCGGAGGCCACAAACGGAT
CGACGGTTCGGGAGGAGGACCTGGAGAAGAATCTGAAGGCCATAGACGAG
CCGCAGTCTACGAAGATGCCCCCGGAGGAGGTGGCGAAGAAAACGCCTGA
TGAGGTCCCAGCCCAGGAGCAGCAGAAGGAACCCGAAAAGGTGGAGCCAG
CCAAACCAGTGCCCCCCAACACGCTCACCCTGAACGTGAAATACGCCACG
CTGCCAAGTCCGAATGTGGTGACCCTGCGATCCCCACTTTCGCCGCCCCC
TAAGCCGCCAATGCTGGGCCGCACCCGCAGTACAGGTCCCGCCGATGGCA
AGGGTCCAGCGAGCAATGGAGCTCTCTCGCCGGACAGCTCCATAATCCGT
CAGAGCTTTCCCGAAGGCGTCATCACGCCCAGCAAGCCGGAAAAGAGCCC
TGCCACGCCCAGCGAGGAAGGCCCGCCGACCGTCTCCGCCCGCCACTACG
AGGGACTGATCGAGGAGCTGAGGTGTCCCGGCTGTGCCGGCGCCATGAAG
GCGCTCATCCTTCTGTGCAAGAGTGGCCACAGTGTCTGTGAACAGTGCAC
CCGCATTTTGCTCATGTGCCCGCTCTGCAAGGAACCCTTCACCAACTCCC
GATCGCTGACCGTGGAGGCGCTGTGCGCCAAGGCGCACTTCCCGGTGCGG
ACACGCCTCCGGCGGCTGCCAGGTGCGGATGCCGGTCGTCCTGCTGCCGT
GGCACGAACAGCAGTGCATGTACAGCCGATGAAGTGCTTCATGGGCCGAG
TGTGGGGCGATTGCCGCTGGCAGGGCCGCGAGTGCAGTGAAAGAGCATTC
TGGAGGAGCAGCACGACGACCGCCTGTTTCGGTCAGCAGCGCTGATCTGG
AATGATCTAGGCACGCCGGCGAACCGTACCGCTACTATGGTCTTTCAGCG
CCACCGACGATGTTCACTCTACGGATTCCCACGACCGCCCAGCGTGTGCT
GTTCACCATGA
FMO09417.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:35:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2681-RA | 2283 | CG2681-RA | 281..1391 | 9..1111 | 4955 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:35:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2708964..2709687 | 9..732 | 3605 | 99.9 | Plus |
| X | 23542271 | X | 2710318..2710608 | 730..1016 | 1085 | 96.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:35:38 has no hits.
FMO09417.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:02 Download gff for
FMO09417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2681-RA | 281..1292 | 9..1016 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:37:32 Download gff for
FMO09417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2681-RA | 281..1292 | 9..1016 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:10 Download gff for
FMO09417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2681-RA | 281..1292 | 9..1016 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:10 Download gff for
FMO09417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2708964..2709686 | 9..731 | 99 | -> | Plus |
| X | 2710320..2710608 | 732..1016 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:37:32 Download gff for
FMO09417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2602997..2603719 | 9..731 | 99 | -> | Plus |
| arm_X | 2604353..2604641 | 732..1016 | 96 | == | Plus |
