FMO09421.5prime Sequence
1161 bp (1019 high quality bases) assembled on 2010-10-13
> FMO09421.5prime
CAGTCGACATGAACTTCCAGATGGCCGAAACGATCAGTACAGCGGCCAGC
GGCATGGAGTTGGCCCTAAAAGACCCCAGTCCAACGGTGGGTGGCGGCAT
CATTGTGGACATGACGCCCACCACGGCGGCGCTGCTGCATCACAACGCTA
TGGCGCTGCGCAGCCTCAAGGATGCCGCCTCATCCGCCTCCGAATCAGAG
CTACAGGAACCGCGATCACCGACACCCACGCCCACGAATCTCAGCACCGG
CCCCCACTCGCCGCCAATGACCTTCCGCTGCGAGCGTTGCGACAGTTTCG
AGACCAGCTCGCGGGCATCCCTGCTGCTCCATGTCGTCCAGTGTCTGGCT
GGTCAGGCGGCGGCGGCGGCAGCAGCGGCGGCGGCATCGGCCCGCCTGAA
GAGTGAGGATCTGCAGGAGCCGGAGAACATGAGCTTGGGTCACATGGAGG
GCGGCAAGGGCGATGGCCAGACGGGCAATGGTTCCAGCTCCTCGGCTAGC
TCCTCTCCGGCCGGGAATAGCGGAGGAGGAGGCGGTGGCAACAGCAGTTC
GCGCAAGGTCTTCGAGTGCGATGTGTGCAACATGAAGTTCTCCAACGGCG
CCAACATGCGCCGCCACAAGATGCGACACACTGGTGTCAAGCCCTACGAG
TGCCGGGTGTGCCAGAAGAGATTCTTCCGCAAGGATCACCTGGCGGAGCA
CTTCACGACGCACACCAAGACGCTGCCCTATCACTGTCCGATCTGCAATC
GTGGCTTCCAGCGCCAGATAGCTATGCGCGCCCACTTCCAGAACGAACAT
GTTGGCCAGCATGATCTGGTGAAGACGTGTCCGCTTTGCAGCTACCGAGC
GGGGTCCATGAAGTCGCTGAGGATTCATTTCTTCAACCGTCACGGCATCG
ATCTGGATAACCCGGGGACCGGGTGGCACCTCTTCGTTGCTCCTGGTCCC
TGGAATCACAGGCTTCGGCGCGGCAGCAGCGGGCGGCAGCTAGTTACGTG
GCCACCTGGACTTAGTCGGGTGCCGGTGCAATCTCAGTCCCAGCAGCAGC
ACAGCACAGGTGGCTCCCTCGGCTAGCGATAGCGGCGAGTCATGCGATCC
CTGGAGAAATGCCAGCCCTCATGCACATCTCAGGCCCCAGTGGGAGATTC
TCCCAGCCTTG
FMO09421.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:35:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12769-RA | 3863 | CG12769-RA | 1209..2341 | 9..1139 | 5285 | 98.3 | Plus |
CG12769-RC | 4740 | CG12769-RC | 314..1436 | 19..1139 | 5235 | 98.3 | Plus |
CG12769-RB | 4707 | CG12769-RB | 314..1436 | 19..1139 | 5235 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:35:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8056244..8057343 | 1108..9 | 5060 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:35:54 has no hits.
FMO09421.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:04 Download gff for
FMO09421.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12769-RA | 1209..2330 | 9..1129 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:37:39 Download gff for
FMO09421.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12769-RA | 1209..2330 | 9..1129 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:18 Download gff for
FMO09421.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12769-RA | 1209..2330 | 9..1129 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:18 Download gff for
FMO09421.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8056229..8057343 | 9..1121 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:37:39 Download gff for
FMO09421.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3943734..3944848 | 9..1121 | 98 | | Minus |