FMO09430.5prime Sequence
1135 bp (1045 high quality bases) assembled on 2010-10-13
> FMO09430.5prime
CAGTCGACATGCTTTACCTCGAAGACTATCTGGAGATGATCGAGCACCTG
CCGCAGGAGCTGCGCGACCGCTTTACCGAGATGCGCGAACTAGATCTCGC
CGTCCAGAACAACATGGACTCGCTGGACAAGAAGGCCCACATGTTCTTCA
AGCAGTGCAAGCGCGACGAACTGCAGCACGAGTCGATGGACACGGAGTTC
CACAGCCTGCGCGGCGAGTACTTCAAGGTGATGGAGGACGCCGACGAGAA
GGTGGCTATTGCCACTCAGATACACGAGCTGGTGGAGCGCTACTTGCGCC
GCCTGGATAGCGAGCTCTTCAAGTTCAAGTGCGAGCTGGAGGCGGACAAC
AACGGCATCACCGAAATCCTCGAGCGCCGCTCTCTGGAGCTGGACGGCAA
CTCCACTGCAGCCACCGCCCTGCTGCTGAGCATGAACCAGAAGGAGAACC
GCTACTACGGCGCCAGTTCGGCCAATACCATGGTGAACAGCTCGACGGGA
CACGCAACGGGTGCCGCCACTGGCTCCTCCGGCATTGCACTGGTCAGTGG
TGCTGCCGGAACGGGCGGTGCCCTCTCCAGCATCTCCACCGCCCAGTTGG
GCTCAAGTCAGCGCCACCGCAAGCTGGAGAAGCGGCGGGAAACCATATGC
ACGGTGCCTGTTCAGGAGAAGCGCGCCAATCTGAATCACTCACTTCCCGT
GGTCGGTTCGGGCTCCACGACTGCCGCGGCAGCCTCATCTTCGTCCGCCA
CAACGGCCGCAGCAGCCGCCAGCCTGGCCAGCGCGACGACTGCCCAAACT
CATGTCTCCAACCACATTGGCAGCATCGCCGCCACTCATCTCACCCTGCC
TGTGGGCCATGGGCGTGGCCCGGCGGCAGTAGCAGTTCTTGCCAGCAGCT
CGCTTGCCACAGGAACGGGTTCGCTGGTCCGCCAACTGCCCACGAACCTT
ACCCACACCGTGCTAAGCACCTCGGGTGGAGCGACTGCCGCAGCGGCAGC
GGGGCGGCACTCCACGTCCGTGTCGCTGCTGGTTACGGCCCACGGGCACG
CCCAATGTTCAGTGGGCACTCGGCCGCCGGGGTCACAGTTCACTTACAAC
TGCAACACTGGGGTGAAGGCCGCCCGCAATCTATG
FMO09430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:36:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ing3-RA | 2298 | CG6632-RA | 128..1228 | 8..1112 | 5200 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:36:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18651812..18652787 | 1089..109 | 4475 | 98.5 | Minus |
| X | 23542271 | X | 18652864..18652964 | 108..8 | 505 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:36:29 has no hits.
FMO09430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:10 Download gff for
FMO09430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ing3-RA | 119..1228 | 1..1112 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:37:57 Download gff for
FMO09430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ing3-RA | 119..1228 | 1..1112 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:32 Download gff for
FMO09430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ing3-RA | 119..1228 | 1..1112 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:32 Download gff for
FMO09430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18651779..18652787 | 109..1120 | 98 | <- | Minus |
| X | 18652864..18652967 | 1..108 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:37:57 Download gff for
FMO09430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18545812..18546820 | 109..1120 | 98 | <- | Minus |
| arm_X | 18546897..18547000 | 1..108 | 96 | | Minus |
