FMO09441.5prime Sequence
1156 bp (1057 high quality bases) assembled on 2010-10-13
> FMO09441.5prime
CAGTCGACATGTACCAGCCGCCTTTGCCACCGCCTCCAGTCCAGCCTGCT
CCTCCGCCCCCGCCACCTCCGCCAGAAGAAGATCTATCTCCACCGGGAGT
AGGTGTTCCCTCTCACAACTATTCTTCAAATGAATCCCATTCTCAGAGCT
CGAAGTCTTTGGATTACGTCTACCCGGAGACACCGGCTCCTTATGCCAGC
TCAGTACCTAGCTATGATCCGTACCAGCAACCACCAGCGTACGGCTACGA
GGGATATGCTTACAACGAACAAGCACAGAAGTATGGTGGCCAGGAGTCCC
ATTACCAATACCAGTACCCGGCATCCGGATCATCATTCCTCTATGAAAGC
TATAAATACCCAGACCGCTATCCTGCTTATTCGTCCAACTACCGACCTCC
ATCCGAAAGGCAGAGGTACACTTCCAACAGCTCCAGTCAAGGCTACCACC
ATTATCCCGGCTATAGCTCGGGTAGGCGGTATGAACAAAGACATGATCAG
GAACACCGTCAAATTCAGGACAGTCGATATGCCCACGAGCCACGACACGG
ACACTATGCCCACAGGCAGGCAAAGGGGTCGCAACACGGATACTATGGAT
CTGCAGCCAGAAACCAAGTCAGCGATGACTATTCGCCACGTGGCCATCAC
GAAAGGGAGAGAAATGAGACCTTAGAGAAGACTAGGGCCAAACCGAAGGT
GGAGACCGAAAGGGACCGTCTGTTGAGACAGTGGTGTTCTAACTTCTGCG
AAAAACCAGAGGACTATGTGAAGAAGATGAACGCCCTCAGCGAGGCGGAT
GCGCCAGTCGAATCCTGGGTGCGATCATCGCCAGCGGAGCTCTACTACGA
GCGCACCAAGAGCGAAAACGAGGTCAGAGGTCGGGCGCGTCTGCAAAAGC
TGTGCACTCTATTCGATGAGGAGCTCCTGCAGAGAGCAAAGCGTGTACGC
GAGAGCTACTCCGTTTACGGTGCCGCCTTCAGAAAGGCTCCGCCGCCGGT
GTTTGCAAGCATAAACACAAGTCGGAAGGCCTGCTCCTCGTCTTCCTCAT
CCGATGACGACCTCCGACGGAAGTCGCTTTTAAGAATCGAGCAAGAATTG
CTGCATGGAGGGGAGCTTCCGCGCCAAGTGTCAACCTCCGGCCACCGCGG
GTGGCA
FMO09441.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:37:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| drosha-RA | 4290 | CG8730-RA | 83..1209 | 4..1140 | 5205 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:37:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7932511..7933611 | 4..1111 | 4920 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:37:05 has no hits.
FMO09441.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:16 Download gff for
FMO09441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| drosha-RA | 82..1202 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:38:18 Download gff for
FMO09441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| drosha-RA | 79..1199 | 1..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:50 Download gff for
FMO09441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| drosha-RA | 79..1199 | 1..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:50 Download gff for
FMO09441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7932507..7933627 | 1..1131 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:38:18 Download gff for
FMO09441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3820012..3821132 | 1..1131 | 97 | | Plus |
