FMO09449.5prime Sequence
1130 bp (1035 high quality bases) assembled on 2010-10-13
> FMO09449.5prime
CAGTCGACATGATCACCGTGATGCCCAATAAAACTGCCATGACGAAAGTC
GAGCCGCCCAACAACGCTCTCAAAGTCACACTACATGGACCAGTACAGAG
TAATGGAGCTGACGGCGTGGACTTGCGCTTGGAATGGCGGAGCTCAGATT
TAAATGTGACTTACCGCCGGACCGAGGTGTGGAACATTGGCATAAGCAAT
GATGATACGGCATACGCGAAAGTGTCGAGAAACTTCATGGTCAAAAGAAC
GGGAGGGGCAGATAGTCAAGCAGTTATCTCGCTGGAGAGTAAACGGAATT
CTCCGATATCCCTGCACGTTGTTATAGACACAAATCCGATGGTCACTGAT
ATGTGCCTCGTTTGTGCAGGGCTCTTGATCCTTGGACTCTATATGCTGAT
CATTTTTGACGTAATCGATCACACCTTTGCTGCACTCATTATAGCTACCA
CAGCTGTCGCGATTCTCGCTATCCTGGAGCACCGGCCCAGCATGCGTGCG
ATAGTATCATTTGTTAACTTCGAGCCCCTAATGTTGCTCTTCGGGCTAAT
GACCATTGTGGATATTATGGCGACAACGGGTGTCTTCGATTTCCTGGTCG
TTTGGACCTACAGGATTTCCAGGGGTCGACCGTGGCCGCTTATTTTTTTT
CTGAGCATGCTGACCGCTTTTTTGTCCGCTTTCCTGAACAGCGATATCAT
GGCTTTGTCACTAACCCCAATAACTATCCGTCTGTGCGAGGAGATGTCCC
TGCGAACCAGCTACGTTCTGGTCGTAATGGCTATATTCGCAGATATGGGC
GGTGCATTAACGCCTTTGGGAAATCCACCCAATGCGATCGTAACGACAAG
TCCGGTTGCGGTTGCGGAAGGAGTTGACTTTGCCCACTTTATAATACACA
TGATGCCAGGAGTGCTGGCCGCGATGTTCGTGTTCTTTGTATATTTACGT
GACCCACAGAAAAAGTATATTTTGTCCTGATCAAATCAGTTGGATCTTAT
GGAGGAGAGAGCAGAGGAAAAAAACCGCCCAGCCAGGAACCCTAAATCGC
ATAGCTCCTCCTCAGGTAGCTTGCAGCAAGTACTGTTGAAGCCAGTAAAT
GCTAATCCAGAAAACATTGCTGGATTGAAG
FMO09449.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:39:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31693-RB | 2080 | CG31693-RB | 231..1349 | 9..1119 | 5150 | 98.1 | Plus |
| CG31693-RA | 2145 | CG31693-RA | 287..1405 | 9..1119 | 5150 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:39:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22015476..22016529 | 9..1057 | 4900 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:39:41 has no hits.
FMO09449.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:41 Download gff for
FMO09449.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31693-RB | 183..1295 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:39:36 Download gff for
FMO09449.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31693-RA | 280..1392 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:07 Download gff for
FMO09449.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31693-RA | 280..1392 | 1..1104 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:07 Download gff for
FMO09449.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22015469..22016550 | 1..1076 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:39:36 Download gff for
FMO09449.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22015469..22016550 | 1..1076 | 98 | -> | Plus |
