FMO09451.5prime Sequence
1125 bp (1047 high quality bases) assembled on 2010-10-13
> FMO09451.5prime
CAGTCGACATGCAGTTCCACCTGATCAGAAAGTACGCCAGCAAAGTTAGC
CGGGAGCACTACGCCAGCAGTAGCGTGAAGATCTTTCGGCGGGTCAAGCC
TCCGCAAAAGGTAAACAAACCAAAGAAGCCGGAGAATGTGGAGAATGGCC
CAACGGAATATGCGGAAAATCTGGTCAAGGTGCAGATGATCTCGCGGAAT
TTGCACGCCCAACTGTTCCCACAAGCGCCGCGAAGCATTTCGGAGCAGCA
GGTGGCCTCCGCTAAGGTTTACAAAGACGAGTTGCGCCGGCACGGAGTCG
ATATCGAAAGTTCTGCTCCTGTTTCGGATGTCCAGTTGAAATTGCCCGCG
CTTAGGGGCGCCAATATTGAAGAGCACTTCCACAACATTGCCAAGGAGCA
AGTGCAGCCATACGAGGAGTTACTACTTCCCCTGGTCCAATGCGAGCAGC
TGCCGAAGCGTCCGAAGCGATGGGCTTTCCATACCGGCTGGACAGCTTAT
GATCCAGAGGATGGAACAGCCACGCCGGTGGATCACCCACTGGAGAAGGG
ACTTGTCTTCGATGTGGAGGTGTGCGTCAGCGAGGGGCAGGCTCCAGTTT
TGGCCACCGCCGTCAGCACCAAGAGATGGTATTCGTGGGTGAGCTCAAAG
CTGACGAAACATCGCCTAAGCGTGGAGAAATTAGAGCCATTAGATGTGGA
CACGGACTCAGAGCGACCGCACTACACTACGGACGAACTCATACCACTGG
GCACCACTGGACCTGGCCTGTGGTGGGTCACAATGTCTCCTACGACAGGG
CGCGACTGAAGGAGCAGTATTTGACCGAGGACACGGGCACTCGGTTCGTG
GACACAATGTCGCTGCACATGTGTGTCAGTGGAGTGACCAGCTACCAGCG
GGCCATGCTCAAATCCAAGAAGGAACCGGCTGCCGAGGATCTGGGCTGGC
TGGAGCAGAGCTCTTCTTAACAGTCTGGTGGAGGTGCATCGCCTCTACTG
CGGTGGGGATACGCTATCCAGGAGCCGAAGAAACAATTTTCGTCGAGGAA
CTCTTGGAGCAGTACGTCGAGCTTCAGTCGTACAACTACTGCCCAGGCAT
GTGGAGGCTAACCATCGAATATCTC
FMO09451.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:39:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tam-RA | 3679 | CG8987-RA | 82..1200 | 9..1121 | 5185 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:39:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13826680..13827691 | 1020..9 | 4965 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:39:48 has no hits.
FMO09451.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:42 Download gff for
FMO09451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tam-RA | 98..1224 | 5..1125 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:39:41 Download gff for
FMO09451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tam-RA | 77..1203 | 5..1125 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:10 Download gff for
FMO09451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tam-RA | 77..1203 | 5..1125 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:10 Download gff for
FMO09451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13826570..13827696 | 5..1125 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:39:41 Download gff for
FMO09451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13826570..13827696 | 5..1125 | 97 | | Minus |
