FMO09452.5prime Sequence
1124 bp (1013 high quality bases) assembled on 2010-10-13
> FMO09452.5prime
CAGTCGACATGAAGAGGCAGTTTGCCAAAATCAAAATAGCAGCCGAAAAT
CTGTCAAGATCGAGCAAGTCGGACAGCAAGGACTCGGAGCTGGAGGCGAT
CGAGCGGCAGGTGGACAGATATCGGGACACCATCGAGAAGATTGTCCGCA
AGCTGCCGGCGCTGAGCGGCGGAGGCGGAAGTGGAAGCGGGAGCAGCGAG
GAGCAGGACAAGCGGACCAAGAAGAACAGTCACTACAAGATTGCCCAGGC
TCTGGACGAGTCCGCCAAGGAGCTGCCCAAGGACATGCCGCTGCAGAAGG
TCCTCGCCAATTGCGGCGAGCTGGAGAAGACGATGGCCGAGTGCATCATC
GAAAGCGAGCTGGAGACGGAGGCCAAGGTGGTGCGGCGGCTGAAGAACAT
CTTGGACAAGGAGATACAGGAGATCTCCACGCTCAAGCGCAACGTGTCGC
GCACCCTGCAGGAGTATACCTCGCTGAAGCGCAGCCATGAGGCGGCAATC
CGTCTGGAGGAACCAGCGGCCAAGGTTAACCACATCAAGAGCCAGCAGGA
GGAGTGCGAGCTGAAGCTGGAAAAGGAGCGGGATGCCTGGGCGGCCCAGA
TGCTGGAGCTGATTGCCAAAGAGGACGAGATCGTTAGCTGCATCCGCGAC
TATGTACTCAACCAAAGAAACTATCACGAGCGCGCCCTGCAGCACGTAAA
CGCCTCGCTGGCCCGCATCCAGGACACTATCCAGGGCACAGAGAAGTCCC
GCTTTGGCACCTCGCTCAAGGAGCATCTGACATCCACAAACCGCGAGATC
TCCTACATAGTGGAGCTGTGCTGCTGCTGTCTGTTAGAGCACGGCCTGAG
GAAGAGGGTCTGCTGCGAGTGGGCTGCGCGAGCACGAACTGCGGCGTATG
AAGCACGCCCTGAGGCGCAGCATGTAAAGACACCGCTTCCGCTGGACTAC
CAGGATCCACATGTCATTGGTTCATACTCAAGCTGTACTTGGCGGTGAGC
TGCCGGAGCCGCTGCCTCACTTACTACTGTACAAGGACTTCATCGATCGC
CTGAAAGGCACAGCGAGGACGAGCGCAGGACAGAAATTAGCATTCTGACT
AGCCTGCAAGGAAACTACCGCGAA
FMO09452.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:39:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RhoGAP92B-RE | 3558 | CG4755-RE | 148..1271 | 9..1124 | 5060 | 97.4 | Plus |
| RhoGAP92B-RB | 3013 | CG4755-RB | 148..1271 | 9..1124 | 5060 | 97.4 | Plus |
| RhoGAP92B-RA | 3016 | CG4755-RA | 148..1271 | 9..1124 | 5060 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:39:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19910891..19911493 | 490..1089 | 2450 | 97 | Plus |
| 3R | 32079331 | 3R | 19905629..19905888 | 57..316 | 1270 | 99.2 | Plus |
| 3R | 32079331 | 3R | 19908433..19908610 | 315..492 | 890 | 100 | Plus |
| 3R | 32079331 | 3R | 19905311..19905360 | 9..58 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:39:52 has no hits.
FMO09452.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:43 Download gff for
FMO09452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RhoGAP92B-RA | 165..1269 | 1..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:39:43 Download gff for
FMO09452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RhoGAP92B-RA | 165..1269 | 1..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:11 Download gff for
FMO09452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RhoGAP92B-RA | 140..1244 | 1..1099 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:11 Download gff for
FMO09452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19905303..19905360 | 1..58 | 94 | -> | Plus |
| 3R | 19905631..19905887 | 59..315 | 99 | -> | Plus |
| 3R | 19908434..19908609 | 316..491 | 100 | -> | Plus |
| 3R | 19910893..19911506 | 492..1099 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:39:43 Download gff for
FMO09452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15731025..15731082 | 1..58 | 94 | -> | Plus |
| arm_3R | 15731353..15731609 | 59..315 | 99 | -> | Plus |
| arm_3R | 15734156..15734331 | 316..491 | 100 | -> | Plus |
| arm_3R | 15736615..15737228 | 492..1099 | 96 | | Plus |
