FMO09469.5prime Sequence
1141 bp (1003 high quality bases) assembled on 2010-10-13
> FMO09469.5prime
CAGTCGACATGAACAAACAAGTTATATTCGGCCTGCTCCTCGCTTGCATT
TTGGTGTGCATTTCAGGACAGGATGAGGAGGATTACCAGGAGTCGCCAAC
GGTACTGATTGCCCTGCTGGTGCGGAACAAAGCCCACATACTGCCCATGT
TCCTCAGCTACCTGGAGCAGCAGGACTATCCAAAGGAAAGAATAGCAATT
TGGTTGCGCTGTGATCACAGCAACGATGACAGCATAGAGCTATTGCGGCA
GTGGCTGGACAACTCGGGGGATCTTTATCACAGCGTAAGCTACGAATTTA
AGCCGGAGGAGCAGAGCTTTGTCAACGGGACTTCACCGTACGAGTGGCCC
GCATCGCGTTTCAAGCACCTAATCGCCCTGAAAGAGGAGGCCTTTCAGTA
TGGTCGCGATATTTGGGCTGACTACGTGTTTTTCCTGGACGCCGATGTCT
TGCTAACTTCAAAAGATTCGCTAAAAGTCCTCACCCGACTCCAATTACCA
ATTGTGGCTCCCATGCTGATCTCGGAGAGCTTATACTCGAATTTCTGGTG
TGGCATGACGGAGGACTACTACTACAGACGCACCGATGAGTACAAGGAAA
TCTATCATGTGAAAAAGCAAGGCAGCTTCCCAGTGCCAATGGTCCACACA
GCCGTTTTGGTGAACATGAACCATCGAGCGGTTAGGAATCTCACCTTCGA
TAGGAACAAGCTGGTGGAATTGCAGAAATCCCGACAGCAAGAGCCACTGT
ACGATGGACCAGCCGATGACATCATTGTGTTCGCCATATCGGCCAACAGT
TCACGCATTCCCTTGCACATTTGCAACGACATAACCTTTGGTTATATACT
GCAGCCATTGGAACCAGGCGATACCTTGGACCACGACGTACAACAGCTGG
TGACCTCAAGAGCATTATGGTCATGAACTCGGCGCAGTGCCGCCACTGCT
GGACTACTACAAGCATTTGAGAAGAAACCGGAGAGAGCATCCTCCTCCTT
GGACCGCTATTTATGATTATCTAAAAGACGACCCGAGCGGCGAGAGAAAT
GAAAGCCTGTTCGACGAGATCGGAATAAGCGGACACTCCGGCCGTTGATG
CAGACTGACACGAAGCTGCTGGAATGCGTACCATTTCTGCC
FMO09469.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:40:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31915-RA | 2487 | CG31915-RA | 131..1235 | 9..1100 | 5105 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:40:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5528519..5529402 | 202..1077 | 3885 | 98.3 | Plus |
| 2L | 23513712 | 2L | 5528253..5528449 | 9..205 | 985 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:40:48 has no hits.
FMO09469.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:50 Download gff for
FMO09469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31915-RA | 160..1278 | 1..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:40:07 Download gff for
FMO09469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31915-RA | 124..1242 | 1..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:34 Download gff for
FMO09469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31915-RA | 124..1242 | 1..1108 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:34 Download gff for
FMO09469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5528246..5528446 | 1..202 | 98 | -> | Plus |
| 2L | 5528520..5529437 | 203..1108 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:40:07 Download gff for
FMO09469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5528246..5528446 | 1..202 | 98 | -> | Plus |
| arm_2L | 5528520..5529437 | 203..1108 | 97 | | Plus |
