FMO09473.5prime Sequence
1106 bp (1006 high quality bases) assembled on 2010-10-13
> FMO09473.5prime
CAGTCGACATGGCTGGCATTTGCCCCCGGGAGGCGGTTCGGGTGAAAGTG
AAGAAATGCGAACCCACTGCTCGGCCGGAGTGGCGAAAGTTTTCAGTGGA
CCCGCAGATCACCACGCTGGAGGTGTTGTACTCCCTGCTGGCCAAGGCCT
TCGATGTCAAGTCGGACTTCTCCATTAAGTACAAGGCCTTTGATCCGGCG
GGCAACGAGATCTACCTGGCCGTGCGCTCCGACTGGGATCTGGATGCCGC
CTTTCTGAGGATTCACAACATTTCCATTCAGACGGCCTCAGAACCCTGCC
TCACCCTGCAGATCGATGTGAAGCCATTTACGGTGGTCAGGGAGTGTGAG
ACCGAGGCCTCCCCGGGTAGATCCATAACGGGAGCGCCTGCTCCCGCAAC
TCCTGCACCTTTTGTACCCGCCCGCGAGCTTATGTCACCACTGCAGTCCT
TAGGAGTCTCCCAGAAATATGTCCAGCACATGCAGACCAAACTGGGCAGC
TCCATTCTGAATCAGATGGAGAAAACCTTCTCCATAGTGCAGAAAGCGTT
TAACTTATCCGAGGAGCATATGGCCAATCTACCGCCACGGCCGCCCATGT
GCGACAGCGAGTTCCGGCTCTTTCTGGACGCACTTGGTCAGATTCAACGC
AAGGACGAGTTGCATAGGGTCATCTTCCTAGGAGGCATTGACCCCAGTCT
GCGGCGCGTTGTGTGGAAACATCTGCTTAACGTTTATCCCGGTGGCGCTA
ACGGACTGGCACTTGATGGACACCAGCGTATGGAATTCATGCGACGAAAG
TCTGAGCAGTACTGTCGTCTGAGAGACACATGGAAAGCGGCCGTGAAGCG
AGGCAGTGTGCTGGAGAACTGGCTTACGTAACGAGCATGGTAAAGATGAT
GTTCTCCGCACGGACTGCCTGAATCCATTTTTATGCAGGCAGCGACGACA
TCAGAACATCGCTGCGCTTTTCAATATCCTCACCACATATTGCACCTAAA
CCATCATCGGTTCATATTGTCAAGGCATGTTCGAATTTGCTGCCGCTACT
GATACCATGAACGACGAGGCCAGTCTAACTCTGCTTTGGTGCGAATATGT
CCGTAT
FMO09473.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8155-RA | 4211 | CG8155-RA | 150..1257 | 7..1106 | 4990 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:41:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15320867..15321890 | 1070..52 | 4490 | 97.7 | Minus |
| 2R | 25286936 | 2R | 15321976..15322022 | 53..7 | 235 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 14:41:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 930..973 | 974..1017 | 112 | 72.7 | Plus |
FMO09473.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:53 Download gff for
FMO09473.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8155-RA | 142..1235 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:40:16 Download gff for
FMO09473.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8155-RA | 144..1237 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:43 Download gff for
FMO09473.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8155-RA | 144..1237 | 1..1087 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:43 Download gff for
FMO09473.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15320848..15321888 | 54..1087 | 97 | <- | Minus |
| 2R | 15321976..15322028 | 1..53 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:40:16 Download gff for
FMO09473.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11208353..11209393 | 54..1087 | 97 | <- | Minus |
| arm_2R | 11209481..11209533 | 1..53 | 92 | | Minus |
