FMO09477.5prime Sequence
1100 bp (982 high quality bases) assembled on 2010-10-13
> FMO09477.5prime
CAGTCGACATGGGCCGTCGTAAGCGTGAAGACTCCTCTGACGAGGAGGGA
GACGACTGTCGCCAGAAGAGGACTGCCGAGACGACGGTGAAGACCGTGGA
GCAGCTGATGAGAGAGCTTAGTTTCCCGGGGCACACTCCGCTCGAATTGA
AGCTGGGGAACCTGGGTTACCTGCTAGGCAAAGGGATGAGTGTTGACCTG
AAGGAGAACCTCATAAATGAGCTAGTAATATGTCTGGGCTATTATCCCGG
ACAGGCCAGTGCCTATGCCACACTTGTGGGCCTAATTAATGTCGCAGACT
TTGAATTCGGCTCCGAGTGCCTGTTGTTCATGGCGCACAAGGTGGGAGAG
TCCGTGCACATTCGCGATTGGAACAGGTGCCGTGGAGTGGTTCACTGCAT
GGTGGATCTGTATCACTGCCAGGTGCTCCCGTCGTCCTATATTCTAAAAT
TGCTCGCAGCCTTCTTGAAGGACTGCGAGGCTCTGAAGGATCCGGACGAT
CTGGTGGGCGTCACACCGCAGATACGACGCGATTTTCTTGCCTACTGTGT
ACTATCCGCCATGCCCCTTATTGGGCGCGATTTGGAGGGGGAGACGGCGT
TTGATAAGCTGATAGTCTCACTCCAGATTTACATTAAGAAGCGGTCCGCT
CTGCACACCAACATGTTGAGTGTGTGGCCGGATTTCAATCAGAGGGACTA
CCTGGAGCTGTTGTGGCAGCAGGTGGACGGTATGAGGCAGAACCATTGGG
CCGAACCGGAGCATCAGTTGATCCCCCGACCTTACAAGTCCTTCTCTGAG
ACCTTGAGCCACGGCCGAATCCACCAGCTAAGGATTATGATTTGGCCGCC
ATGAGGAGCGATGTCGGTATCCGCTGCCGCGTGTATGTTTTCGCATCTCT
CCTGCGACTCTGTCGGCGAGATCCCTAATATGCCCCCGCCGGTGAGCATC
GAAATGCATCTGCTGGAAGCCCATATTCTTGGAAATACTGATCCTCTTTT
CATAGGAGAGAAAAATTTTGTGCGGATAAGCTTCTGATGTACCGCCGCCT
CCTAGCTCCAAATGCGGTCTATTACTGCAATGTGGAGGTGTATCTTTGGG
FMO09477.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:41:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7907-RC | 2616 | CG7907-RC | 182..1269 | 9..1096 | 5005 | 97.9 | Plus |
| CG7907-RB | 2733 | CG7907-RB | 299..1386 | 9..1096 | 5005 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:41:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21404098..21405180 | 9..1090 | 4775 | 97.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:41:17 has no hits.
FMO09477.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:55 Download gff for
FMO09477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7907-RC | 165..1262 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:40:23 Download gff for
FMO09477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7907-RB | 292..1389 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:50 Download gff for
FMO09477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7907-RB | 292..1389 | 1..1100 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:50 Download gff for
FMO09477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21404091..21405188 | 1..1100 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:40:23 Download gff for
FMO09477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17229813..17230910 | 1..1100 | 97 | | Plus |
