FMO09484.5prime Sequence
1085 bp (992 high quality bases) assembled on 2010-10-13
> FMO09484.5prime
CAGTCGACATGCACAGCTCCCAGCAGCCGGCGGAGCGTCTGCCGCTCACC
AAGGGCCGCACCGTGAACGGTCTGGTCAAGCGCTTGTCAATGGAGCGCTT
CTCCCCGCAGCCGGCGATCAGCCAGCCGGCCTTTTCTTACATTCGGCCCA
ACGAGGGCATCACATATGCCCAGCTGGATCTGGGCGAGGATCAAGTCCGA
CGATCGCCAATGGACCGAGATGTCCGCACACCCCAGAGGGAGTTCGCTCC
TGCTCGGCCGCCGAGGGCCAGCGATGTGAGGCCCAGTTACTCGCCCACAT
CCAATGGCGCTCCTTTGGCCAGCAGGCCCAGTCATTCGCCTTCGCCATGG
CAGCAGCTGAGTCCCCGCAATCTAAGCGACGAGGACGAGGGCTTGGGTTA
CGAGCCCAGGAAGGTATACTATGAGGAGGAGTTCCCCCGAAGGTCGGAAC
CTCCCATTGTGCCCGTCATCAGGAGTGTCAGCCCCTCGCCCTACTTGGAC
GAGTTGGGCCATCGACGAGCTCAGCTGGAGACGCGTATCCTGACTCGGCG
GTTCGGGGAGGGTGCCACCCTGGAACGCCAGGCGGACAGAAATCGGGAAG
TGGGCAGACCCACTCCGGAGCGGGAGCCAGAGCGCTTCCACCGACCTGTG
CGCCAGGAGCTGTCCAACGAGTTTTTCGCCAGAGCGTACCCAAGTTGGAC
AGTTGGCTCCACGCTGCCCAGGATGGAGAAAACCTCTCGCTACCGACACA
CCAAGTACTACGACGACGGACACGGAGGCGTCAAGGATACCTATGTGCGG
GAAACCCAGAGGGATGGACAGGTGCGGGAGTCGCGGCATCGCGAGCGCAT
CGGCGAACGGGAGCGGGACTACAACTCGGCAGATCGGCTGGAGCAGGAGC
CGAGAGCCTTGACTCTCAGTTGACGGATCAGTACCGATCCTCGCCAGAAC
TGCGCTCCCAGCAACCCAAGCAGCGGGAGCAGCGGGAGGACTACTGGCAG
AGCAGCTTGAATCGGAACAGCTGCAGCACGCAGCTTCGACAAGGTGGACT
TCTGGCAATGAAACGTATTTCCGGAAGGAAGTCCT
FMO09484.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:41:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8740-RE | 4882 | CG8740-RE | 1633..2709 | 7..1085 | 5030 | 98.2 | Plus |
| CG8740-RD | 4918 | CG8740-RD | 1669..2745 | 7..1085 | 5030 | 98.2 | Plus |
| CG8740-RA | 4136 | CG8740-RA | 887..1963 | 7..1085 | 5030 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:40:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8753153..8754224 | 7..1079 | 4835 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:40:59 has no hits.
FMO09484.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:52 Download gff for
FMO09484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8740-RA | 870..1950 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:40:14 Download gff for
FMO09484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8740-RA | 883..1963 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:41 Download gff for
FMO09484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8740-RA | 883..1963 | 1..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:41 Download gff for
FMO09484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8753149..8754229 | 1..1085 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:40:14 Download gff for
FMO09484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4640654..4641734 | 1..1085 | 97 | | Plus |
