FMO09490.5prime Sequence
1130 bp (1012 high quality bases) assembled on 2010-10-13
> FMO09490.5prime
CAGTCGACATGAACGATGCAATGGAAGAAATGCTGCTTCGACCAGCCATT
ATCACCTGCCCGGAAGTGCGCACCAAACCTACTCCTCCAAACTTATCGCG
CAGCAAATCCAAAGCTTCTGTGGCAGTTAATTTGGGCGAACCTCCTGTTC
AAATCGGCCGGGATAATCTTGGCAGCTCGGAGAGCTGCAGCTCCATTCTT
CTTGACTACGTTAATGATCAAAGCAAGCAACTCAAGTCGGACCTGCAGGC
CGAGCAGTCAAACTCACTGAAATCGATGAGGCTAAAGAGTTTGCTTGAGC
GCATTGAGAAAATTCGAGTCCAGCTGTTGGAGGAACTGAAGGCGGGTGAG
TCAGGTGCATCAAAGGGTGACAATGCACAGGAATTGAATAATATACGTCA
GGAGCGAGCTGATATTCTATCCGAGCGAACGAGAACTTTAAACGAACGAG
AATCTGATTTGCAACAGAAGGAGGCTATTCTCGAGCAGCGTCTAAGAAAG
TTCTACAAGGAGACAAAAAACGCAAAATCCAGTGAGAGTGATAAGCCAAA
ATCAAACGCAAAAGAAGATGGGCCAGTTGAGATCATTATTAAGGTGAGGA
GTGACGGTACTGTTAAGCAATATGTACCGAGAACAAAATCGAAAGCCAAA
ACCAAGCCGTCGGCTATCGACAATGAAAAGGATGTGCCCCTGGGCTCAAC
TGACAGCACACCAAGAGACGATGAGCCAAAGCCGACGGAACAGGATCACG
GAAAGCGACCATTCTTACAGGATCAGCGTCAGATATCCATTGATTCCAAC
TCCACTGCCTATCGCAGTCTGCCGCCAGTGAGCTATAAAATATGACCACG
GCCGCTCCCCCTTCTGCTCCATTACATCCCATGGTGGTTCAATATATAAA
TCGTCTGCTAGGAATGACCCGCCAAAATATCGATGAGATGGGTGTGAGTT
CCTCGTGTGTGACCACACCATCACGTCGGTGATCAACTCATTGAGAACGT
AACCCCCTGTTCCGAGCCTGATGGAAGAGCTGAAAGGAATCAGAATGAAA
TACGAATGACGAGCATCGCATGACGGGTGCAAGCTTTATTGCCTGACATT
CGCAGCCTATCATGACTGGAAGAATCAATC
FMO09490.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:42:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ana1-RC | 5610 | CG6631-RC | 2131..3266 | 9..1129 | 5130 | 97.6 | Plus |
| ana1-RA | 5526 | CG6631-RA | 2047..3182 | 9..1129 | 5130 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:42:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24532916..24533963 | 9..1050 | 4905 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:42:04 has no hits.
FMO09490.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:03 Download gff for
FMO09490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana1-RB | 881..2016 | 9..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:40:50 Download gff for
FMO09490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana1-RA | 2047..3182 | 9..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:12 Download gff for
FMO09490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana1-RA | 2047..3182 | 9..1130 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:12 Download gff for
FMO09490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24532916..24534051 | 9..1130 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:40:50 Download gff for
FMO09490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20358638..20359773 | 9..1130 | 97 | | Plus |
