FMO09494.5prime Sequence
1116 bp (1033 high quality bases) assembled on 2010-10-13
> FMO09494.5prime
CAGTCGACATGAGCTGCTTTAGTGCGATGAGTGCCCCGCTGCTGGGCGAG
ATGGAGCAGACCATTGGTATGCTGGAGCGCGGCACCATCGTGACCAAGTT
GTATGGGAAACAGCGTCGTCCGGATCGCCGCCACCTGATGCTCATACGAG
AGACACGACAGCTGCTCTGGGCAACGGTGGCCACACAAACGCCACGCACC
GACTACGAGGGCGCCATACAGCTGCGGGAGATTCGCGAGATACGGGTGGG
CAAGCACTCGAAGGAGTTTCGCCTGTTTGCCGACGACTGTCAGCGCTTCG
AGTCCAGCAAGTGCTTTGTCATACTGCACGGCAATCACTTCAAGCTGAAG
AGCTTCTCGGTGGTGGCTCTGTCGGAGATCGAGGCCGACAATTGGGTGCG
GGGATTGCGTTACATGGTTAAGGACACACTGGGAGCACCCTATCCCTTGC
AAATTGATCGCTGGCTGCGTCGCGAGTACTATCAAATCGAGAATGTTAAC
ACGCATTCCGCCAAGGCCACGGAACAGTCGCCAGCCCAGGTGACCATTAA
GGACTTTAAGCTCTTTTTGGCCGGAGTTAGCTGTAAGATGACCACCGGCA
AGTTCATGGAGCACTTTACCGAGGATGTGCGGCGCAAGCACGATCTCAAG
TTTGATGATTTCTCGCGGCTATATCAGAAGTTGCTGCTGCCCAACGGATT
TGCCAGCGTCTTGTCCGGATCGGGAGTGGCCAACTTTCCCTATTCGGAGG
ACCAACAGGTGGTGCGACCGGCGGAGCTGAGCAGTTCCTCGAGACGGAAC
AGCGCGATGTGAGCGCCAGTGAGATCAGTAGCGCAGCCATTGCCTCCTTC
ATTCGGGACTTTGTTCAGGACGTGGAACGTGATGTTCAGGAGCCGTATCT
CACCTTCCCGGAGTTCGTCGACTTTCTGTTCTCCAAGCAAAACGACCTGT
GGAACAGCAAGTACGACCAAGTGTTCATGGACATGAACCTGTCGTTGTTC
CTCCTACTGAATCGCATCGTCGCACAAATACCTACCTGACGGCGAATCAG
TTCCTCAGTGAATTCTCCTGGCGAGAGCTAAGCGGCGCCTTTTGCAATGG
GGCCTGGCCGGTGCAT
FMO09494.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:41:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sl-RA | 5678 | CG4200-RA | 272..1332 | 9..1070 | 5120 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:41:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16350586..16351646 | 9..1070 | 5045 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:41:35 has no hits.
FMO09494.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:58 Download gff for
FMO09494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sl-RA | 274..1344 | 1..1078 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:40:33 Download gff for
FMO09494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sl-RA | 268..1338 | 1..1078 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:59 Download gff for
FMO09494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sl-RA | 268..1338 | 1..1078 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:59 Download gff for
FMO09494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16350582..16351652 | 1..1078 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:40:33 Download gff for
FMO09494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16244615..16245685 | 1..1078 | 98 | | Plus |
