FMO09495.5prime Sequence
1105 bp (1000 high quality bases) assembled on 2010-10-13
> FMO09495.5prime
CAGTCGACATGTCGAAACGGAGCGCCGACGACGCCACCGGCAGCAGCTGC
TTGGTGGCCGCCGCAGCCGCCGGCCAGCCGCCCATCAAGAAGGTGCACTT
CGAGCCCCATCTGATTGGGCCGGTGTCCACGCTGGAGGAGATGGACATCA
AGGTGCTGGAATTCCAGAACAAGAAGCTAGCACAGCGCATCGAACAGCGG
ATGCGAACGGAGGCGGAGCTGCGACATCGAATCGAGCAGCTGGAAAAGCG
GCAAACGCAGGACGACGCCGTTCTAAACGTGGTCAATCGGTATTGGAATC
AGCTGAACGAGGACATACGAGTCCTGCTGCAGCGCTTCGATGCCGAGACG
GCCGACGAACTGGAGAACCGGAATGAGAACGAGGTGACCACCTCGTTTCT
CGCCCAACTGTCCACCTGGGACAAGGAGGAGCTGGACGAGAAGCTGGCCA
ACCGCGTCCAAGTGTCCAAAAGGGCGGTCGCCAAGATCGTACAGGTTATT
GATAGGTTAATGCAACGCAATGAAAAGATAACTCATGTCTTGAAAGGTGA
TAGTCTGGCTTCAGCTGGCTCCGGTTCAGGAGCGGGAGCTGGCGGCGAGG
AGGAGCAGCAGCAGGCCAGCGGCGATGCGGAGACCACAACGTCATCGGCC
GGTGTCCATGCGCTAGAGGAAACCCTGAAGCAAACGCACATCGAGATCAT
GAGCGAAAATCACAAGCTGCAGAATCTGAATACCTCGCTGCACGAGAAGT
TCCACACCATGTCGCTGAAGATGAAGGAGTACCAGGACGCTCATACCGCC
AAGGAGACGGAGAACGCCGAACTGAAGATCCAGATAGACGAACTGCAATA
TGACCTAGAGAAGATCCATTGCCGGAATGATAAGCTGGAGAACCACTTGG
CCGAGGCTATTGAAAAGCTGAAGGGCCTACCACCAGATTTACGGTGATCC
CATAAGAGCACTAATAGTGGCCAAGACACCACTACCACAGGCAGCGGGCG
GCGCCACCACAGGCGTTAATAGCAGCTATTGAGGAGCTGCCATAGGAGCT
GGGAGGAAGTAACCGCGTATCTGGCAACACCCGACTGTCAGGGAGCTGGA
AATAG
FMO09495.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:41:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bre1-RB | 3993 | CG10542-RB | 145..1232 | 9..1100 | 5030 | 98.1 | Plus |
| Bre1-RA | 3632 | CG10542-RA | 145..1232 | 9..1100 | 5030 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:41:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5792801..5793845 | 1052..9 | 4815 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:41:38 has no hits.
FMO09495.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:59 Download gff for
FMO09495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bre1-RA | 135..1207 | 2..1075 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:40:35 Download gff for
FMO09495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bre1-RA | 136..1208 | 2..1075 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:01 Download gff for
FMO09495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bre1-RA | 136..1208 | 2..1075 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:01 Download gff for
FMO09495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5792754..5793855 | 1..1105 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:40:35 Download gff for
FMO09495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5785854..5786955 | 1..1105 | 97 | | Minus |
