FMO09505.5prime Sequence
1124 bp (964 high quality bases) assembled on 2010-10-13
> FMO09505.5prime
CAGTCGACATGGGCGAAGAACTCCCGATATTGAAGGGCATACTTAAAGGC
AACGTCAACTATCACAATGCGCCTGTGCGTTTTGGACGCGTGCCGAAGCG
CGAAAAGGCGCGTATCCTGGCGGCCATGCAACAGAGCACCCAGAATCGCG
GCCAGCAGCGAGCCCTCGCCACCGAGCTGGATGACCAGCCACGCCTCCTC
GCCGCCGTGCTGCGCGCCCACCTCGAGACCTGTGAGTTCACCAAGGAGAA
GGTCTCGGCGATGCGGCAGCGGGCGCGGGATTGCCCCTCCTACTCCATGC
CCACACTTCTGGCCTGTCCGCTGAACCCCGCCCCTGAACTGCAATCGGAG
CAGGAGTTCTCGCAGCGTTTCGCCCACGTAATTCGCGGCGTGATCGACTT
TGCCGGCATGATTCCCGGCTTCCAGCTGCTCACCCAGGACGATAAGTTCA
CGCTCCTGAAGGCGGGACTCTTCGACGCCCTGTTTGTGCGCCTGATCTGC
ATGTTTGACTCGTCGATAAACTCAATCATCTGTCTAAATGGCCAGGTGAT
ACTACAGGGATGCGATCCAGAACGGAGCCAATGCCCGCTTCCTGGTGGAC
TCCACCTTCAATTTCGCGGAGCGCATGATCTCGATGAACCTGACAGATGC
CGAGATAGGCCTGTTCTGCGCCATCGTTCTGATTACGCCGGATCGCTTCG
GTTTGCGCAACCTGGAGCTGATCGAGAAGATGTACTCGCGACTCAAGGGC
TGCCTGCAGTACATTGTCGCCCAGAATAGGCCCGATCAGCCCGAGTTCCT
GGGCCAAGTTGCTGGAGACGATGCCCGATCTGCGCACCCTGAGCACCCTG
CACACCGAGAAACTGGTAGTTTTCCGCACCGAGCACAAGGAGCTGCTGCG
CCAGCAGATGTGGTCCATGGGAGGACGGCAACATCAGCGATGGGCCAGCA
GAACAAGTTCGCCCTTGGGCAGCTTGGGCCGGATGCCATTGGACGTTGAA
GGCGGCCAATAGTCCGCTTGGCTTCGGGTATCGAGCCACTTGAGTTCCGC
CCGACCTGGAAATATGGCAGTTCCGAAGCTGTTTTCGCAGCCCACAGGGC
GTGTTCTCTGCCCTCCGCTGCTTC
FMO09505.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:37:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip75B-RD | 3750 | CG8127-RD | 747..1831 | 9..1115 | 4815 | 96.9 | Plus |
| Eip75B-RG | 3876 | CG8127-RG | 937..1957 | 73..1115 | 4495 | 96.7 | Plus |
| Eip75B-RF | 8236 | CG8127-RF | 2892..3912 | 73..1115 | 4495 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:37:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17955521..17956229 | 1023..306 | 3010 | 97.2 | Minus |
| 3L | 28110227 | 3L | 17959381..17959620 | 312..73 | 1200 | 100 | Minus |
| 3L | 28110227 | 3L | 17961005..17961068 | 72..9 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:37:35 has no hits.
FMO09505.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:21 Download gff for
FMO09505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip75B-RD | 747..1752 | 9..1023 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:38:32 Download gff for
FMO09505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip75B-RD | 747..1752 | 9..1023 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:03 Download gff for
FMO09505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip75B-RD | 747..1752 | 9..1023 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:03 Download gff for
FMO09505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17955521..17956223 | 312..1023 | 97 | <- | Minus |
| 3L | 17959382..17959620 | 73..311 | 100 | <- | Minus |
| 3L | 17961005..17961068 | 9..72 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:38:32 Download gff for
FMO09505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17948621..17949323 | 312..1023 | 97 | <- | Minus |
| arm_3L | 17952482..17952720 | 73..311 | 100 | <- | Minus |
| arm_3L | 17954105..17954168 | 9..72 | 100 | | Minus |
