FMO09508.5prime Sequence
1118 bp (1023 high quality bases) assembled on 2010-10-13
> FMO09508.5prime
CAGTCGACATGCTGAAAATGGCAATGGCAAATGGTGCAAATCCGCTGCAA
ACAATGAAGAAAGCAAACGGCGACGAGGAGTCCGATGAGTCCGATATGGA
AGAAGAGGAGGAGGATGAGGAAGACGAGGAGGAGGACGATCTGCCGGATG
TAGCACTCCAAATCGACAGCGAGGATGAGGCGGAACTGGAGGCGCAGCGC
ATTCGTTTGGTGGAAGAAGAAGCAGCCAAGACAACAAAAAAGGCCGAGAA
AGAACGGCAGCAGCTGCAACAAAAACAACAACGGCAAGCGCAGGTCAGTA
ACGGTAACGAAGAGCAGCTGGAGGAAACTCAAAAACCCAGCAACAACAAA
CGCAAGGCCCGTGGGAGGCCAAAACGCAAGATATCCACTAGCTCGCAGGC
CTCCAGTGCCTCCATCGCCTCCAGTGCTACCTTGGTGGCCGCTCAAGTTC
TCGCAGATCAGAAGTCACGCCGCTTCATCTACAGCTGTACCAGCTGCACA
CACCACTACGACGACAACCTGATCCTGTCCAGACACTTCCAGCTGGAGCA
TGTCGAGAAATCGAAAAGGAAGCGAGGCAAAACCAAGGCTGCTGCTGAAG
AACCCATGGTTACTCCTCCCTTGATCATTGATCCCTTGGAAATGGGCCAA
CTTAAGCCCTGCGCCCAGTTGCTTGTCCAAGGAGAATCCGTGCTGCAATT
ATGCCTCGCCTGTAATTCACAGTTTGTGGATGTGGTACGCTTTCATGAGC
ATCTTAGCCAGCAGCATGGCTATTTTCAGTTGCTGGTGCCCAAGGAGGAA
CCCACCGATCTCTCACCGCATGCCATGGTCACAATTCCCGGGGCTCTGGC
TCTGAACAAGGCCAATGCCCAGCTTCAGCTGCCCATTCCAGCTCCGGAAC
TCCGCCACCCGAGCAGGACGGCAAGGAGGCTCCACCAAGTAACGCGTCCA
TGACAGGAGGATCTCACCATGATCACGACATGGTGGCGGTTATTGCAGCC
GAGCTGGGTGAAGAAACCAGCAGCTCCAAGTCACAGATGATTCATCAACT
TCCTATGCCCAAAAAGAGCCGATGCGCACCAGTCCGGAAAGCTGCGACGA
ATGATATGTCGGAAAAAC
FMO09508.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:38:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7372-RA | 4172 | CG7372-RA | 135..1201 | 6..1065 | 5025 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:38:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15620035..15621063 | 6..1030 | 4810 | 98.7 | Plus |
Blast to na_te.dros performed 2014-11-26 14:38:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3292..3321 | 253..282 | 114 | 86.7 | Plus |
FMO09508.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:31 Download gff for
FMO09508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7372-RA | 70..1146 | 1..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:39:06 Download gff for
FMO09508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7372-RA | 128..1204 | 1..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:34 Download gff for
FMO09508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7372-RA | 128..1204 | 1..1068 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:34 Download gff for
FMO09508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15620028..15621101 | 1..1065 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:39:06 Download gff for
FMO09508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15613128..15614201 | 1..1065 | 98 | == | Plus |
