FMO09512.5prime Sequence
1118 bp (1014 high quality bases) assembled on 2010-10-13
> FMO09512.5prime
CAGTCGACATGGGTCCGACGGATCAAGACTGGATCGGCTGTGCAGTGTCT
ATAGCCTGCGACGAGGTCCTGGGCGTCTTCCAGGGCCTGATCAAGCAGAT
TTCTGCCGAGGAGATCACCATTGTGAGGGCTTTCCGCAATGGCGTGCCGC
TGCGAAAGCAGAACGCCGAGGTGGTCCTCAAGTGCACGGACATTCGCAGC
ATCGATCTCATCGAGCCCGCAAAGCAAGATCTGGATGGGCACACGGCGCC
GCCGCCAGTGGTCAACAAGCCCACGCCCGTCAAGCTGCCCCACTTCTCCA
ACATCCTGGGCAAGCAGCAGCAGCTCCAACTCCAGCAGCAGCAGCAGCAG
CTACAACTCCAGCAGCATTTTTAAACAGCAGTTCCAGGAGCAGGAACGAG
AACAGGATCTGCCATCGACGCCGCGGTCAAGGGCCAACGACAATGGACGG
GTAGCGGCTGGCGGAGCATCGAGTTCTTCGGGCCCACGTGGCAACTTCAA
TTCGGCGCTAAGCGATAAGATGCATCAGCTGAAGCTAATCGAGACCAACG
GCTCAAATGGCACCCTTAGAACACCACAAACATCCCGTGCGTCCAGCGCT
CAGCAGCAGCCGCAGATATCAACGACTCCCAACAGCGTGGCCGCCTTTTT
TGGCAACATGATACCGCCGAAGGTCGAGGTGAAACTGGGCTCCTACGTGA
GCAACACCCGGGAGAGTTACTGCAGCAGCAGCGGAGATAGCGGCGAGGCA
ACTGGTTTGTCGTTGGGCAGCAGCAAACCCATAGATATCGTCAGCAACGG
AGATGGATTTTACAAGCAGACGGCAGCCTCGAGCTATGGGAATACAAATG
GAAATGTAAGAAGGAATGGCAATGCCAATAACAATGGAAATGGCACCGGA
AATGGTTCTTATACCAATGGAAATGGCAACGGCAACGGGAAGAACAAGCG
GAACACGGTGCGAATGGGAGAGCAGCATGCGGCAGCAACAGGTGCAACTG
ACTTTGGCAGCGAGGCGGACGATCGCTGATCCACGAGGATTCGATTTTGA
GGGCAATCTACCGCTGTTCGACAAGGCAGGCAATTTGGGGGAACGAACAT
CTCGATTCCGACCGAACC
FMO09512.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:37:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Edc3-RB | 4062 | CG6311-RB | 392..1474 | 7..1089 | 5190 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:37:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17528909..17529470 | 569..7 | 2705 | 99.1 | Minus |
| 3L | 28110227 | 3L | 17528100..17528622 | 1089..568 | 2345 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:37:45 has no hits.
FMO09512.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:23 Download gff for
FMO09512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edc3-RB | 401..1497 | 1..1101 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:38:38 Download gff for
FMO09512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edc3-RB | 386..1482 | 1..1101 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:08 Download gff for
FMO09512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edc3-RB | 386..1482 | 1..1101 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:08 Download gff for
FMO09512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17528092..17528620 | 570..1101 | 97 | <- | Minus |
| 3L | 17528909..17529473 | 1..569 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:38:38 Download gff for
FMO09512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17521192..17521720 | 570..1101 | 97 | <- | Minus |
| arm_3L | 17522009..17522573 | 1..569 | 98 | | Minus |
