FMO09532.5prime Sequence
1139 bp (1041 high quality bases) assembled on 2010-10-13
> FMO09532.5prime
CAGTCGACATGAACCCGTACAATAAGTTTCAAGATATGGTTTTAAAGCAA
TGGTTGGTCATGGATGATGCACTTTTCCAAGCATGTGGGTTTTGTCTAGT
TGCGGCATCTGATGACCAGTCGGTGTTTATCACTTGGGACAAGTATTATT
TGCTAAACATACGCTTTAAGATGCCAGAGGACAGCTGCAGGATAAAAATG
ACTGCTGTGCGAATTCCTGTGCCTAAAAGTGGAGGAGGCTATATTAGGAG
TGTGCATGCTTTGAGGTACAATACGATTCTGCATATGTCGAATGGGGAGT
TATACAGCTTTACCTCATTTAAGGCCCTGAATCTTATAAAATGGCTCAAT
GCAGTTCGTTGTTTAGCTATAGTCGATGTGGGATTCAGCGTGATTCGAAT
AGAGAATCGCCGACTGCTGCTGCAGACGTATGTTGATCTTCCTGATTGGG
AAAAGGACAAGTGTACACTGCAACATTCATTTGACATAACTTTTGACCAG
GAGAACATATTTCAGAGCGACTGGCAGCATAACGAATACACTCTGACAAC
TTTAAAAGTGACCGAAAAGGAAGAAGAGTTCGCACGAACTCTTTTCGGCA
CAAGAGCGGCAGAACAAAATTATATTCACATATTCAGCATAGGTGGACAT
GTATTTGCGTTGGCTTATAATTACAAAACAACATCAGATAGTACCGGTCC
TGACTATAATATCGAGCTCCTGTGCATTTATGCAGCGCACGTTAAATTCA
TTAAACTGCTACCAATGGAGAACCTTTGTTTGATTTTTCTCGGCTCTGGC
AGTATAGACATGTGGTACACGTCCAGGCTCCTTTCTATAAAACAGCGTCA
AATTTTTCACACAGGTGCTGAATGGCTGGACTACGATGCAACAAGTGCCA
ATGGCGACGTCTATTACACAGACGGAACCAGCTAGTGCGACTGCGATTCA
AATACAACGCCCAGCTTGACGAGTGTTTTGTCTACACCTTGACGAAGCCA
GTCCTCCGGGATTAACGCATGCTGTTGGAAAGACCAAAAAGAGAATTGTT
CTGCCTGGACGACAAACAACACACTTTATTGCATTTCTTTGGGAATGTCC
GAATGACGAATCAACGCTGAAAATTCCACGCCGAACTGA
FMO09532.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:38:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17490-RG | 2877 | CG17490-RG | 644..1776 | 8..1137 | 5320 | 98.4 | Plus |
| CG17490-RE | 2315 | CG17490-RE | 82..1214 | 8..1137 | 5320 | 98.4 | Plus |
| CG17490-RF | 2953 | CG17490-RF | 334..1156 | 318..1137 | 3755 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:38:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22538311..22539406 | 8..1103 | 5185 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:38:17 has no hits.
FMO09532.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:28 Download gff for
FMO09532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17490-RB | 15..1141 | 1..1125 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:38:56 Download gff for
FMO09532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17490-RE | 75..1201 | 1..1125 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:25 Download gff for
FMO09532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17490-RE | 75..1201 | 1..1125 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:25 Download gff for
FMO09532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22538304..22539430 | 1..1125 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:38:56 Download gff for
FMO09532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22431036..22432162 | 1..1125 | 98 | | Plus |
