FMO09533.5prime Sequence
801 bp (801 high quality bases) assembled on 2010-10-13
> FMO09533.5prime
CAGTCGACATGAGAGTTATGAGAGAGAAAGACCACTCACCAAGAAAGATG
CTTCCTAGCCCGAAACAGGGCTGCGTATACCCTGCCTTAGGATTAATACC
CACATCGTATATATCACACGTACCTTATGATCTGGCCTCCTCAGCGTCGG
TGGCGGCCACATCCTCGTCATCAACGTCGCCGACGACGACGTCGGCAACG
ACAACTGGGCGGCTGCAGCACCAACACTCCCACCAGCAACACCAGACCTT
AAATCACCATGCCAAGGGCAAGCGGAGAAGCAGTTTCGATCAGCCGTTGG
ATCTGCGGTTGGCACACAAGCGGAAAACGGACCTGGTGGATCAAGGACCC
ATGGAGGATGAGAACAGCAACCTGATCATGTTCGCCAGTGAACTGGCGGT
GGCTCAGCAAAAGGAGAAGGAGCTGAACAACAACCATATCGCAGCATCGC
TGGCCGACCTGGGCTTTGATATGAGCCGCAAAATGCTGAGGGCCTTGAGA
GAGGGTGGTGCAGGTGGCGGTGGCGGAGGAGGAGGAGGAGGAGGAGGCGG
TGGTGGACCACCCAACGCACCGCCCTTAACACCACCGCAATGTTCGATAC
CTGCCGTACATCCCACACTCCTAGAAGCCATGACCAAGAACTTGCCCTTG
CAGTATCGCAATGTGTTCGCTGGGGTTTTGCCGGGCAATGTGAACAGTCC
GGCGGCCTCCAGTTAGTCCAACGGGCGCGGATTTTGCGTTCCGGGCATCC
GCTCAAGAAATGCTAGCTCACCTGGCCACCGCCCACAGAGCATTTGCAAC
T
FMO09533.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:38:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10348-RB | 2611 | CG10348-RB | 765..1555 | 9..801 | 3840 | 99.1 | Plus |
CG10348-RC | 3878 | CG10348-RC | 1870..2660 | 9..801 | 3840 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:38:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18715671..18716461 | 801..9 | 3790 | 99.1 | Minus |
Blast to na_te.dros performed 2014-11-26 14:38:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6892 | 154..271 | 146 | 60.5 | Plus |
FMO09533.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:29 Download gff for
FMO09533.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10348-RA | 1..752 | 48..801 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:38:58 Download gff for
FMO09533.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10348-RC | 1862..2660 | 1..801 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:27 Download gff for
FMO09533.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10348-RC | 1862..2660 | 1..801 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:27 Download gff for
FMO09533.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18715671..18716467 | 1..801 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:38:58 Download gff for
FMO09533.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18715671..18716467 | 1..801 | 98 | | Minus |