FMO09536.5prime Sequence
473 bp (473 high quality bases) assembled on 2010-10-13
> FMO09536.5prime
CAGTCGACATGAAAGCAAGCTTATTTGAAGCTAAAATCGAACGTCTGGGG
CGTTCAGATTACGGACTTTCGGCCATCTTAGAGTGGAAATATGACACGAA
TGAGGAAACGATGGTTGAGGCACAAGCGTATCGCAGTAATTCGGGCGATG
AGAGTGATTACAAGCTGCTACCCTGGGCAATACCCAAACAGCCCTTCTAT
GATTACATCAACACCTACTATAAGGATGTGATCTCAAAAAACCTCGGCTA
CTGCTCCAATCTACCCAAATACGAAGATAAATTTCAGCCTCCCTGGCCAA
AGAACACCTATAAGCTTGACAAGTGCAAAATCGGTGGTGATGGATTGCCG
GAAATCGCTCCGCCAGGATTCTACAAGATCGTATTCACTAAATTTGGTCC
TGGGCAGCCAACTTGGGGTTTCACAGCCGTTTTTAAGCTGACTAACAAAA
TTTTCGCAAGCTTTCTAGACCAT
FMO09536.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:46:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18536-RA | 788 | CG18536-RA | 277..725 | 9..455 | 2205 | 99.6 | Plus |
CG18537-RA | 607 | CG18537-RA | 207..358 | 81..232 | 265 | 78.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:46:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18295253..18295595 | 113..455 | 1715 | 100 | Plus |
2R | 25286936 | 2R | 18295091..18295199 | 9..115 | 480 | 98.2 | Plus |
2R | 25286936 | 2R | 18296307..18296407 | 132..232 | 205 | 80.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:46:37 has no hits.
FMO09536.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:44 Download gff for
FMO09536.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18536-RA | 271..725 | 1..455 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:43:06 Download gff for
FMO09536.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18536-RA | 271..725 | 1..455 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:19 Download gff for
FMO09536.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18536-RA | 271..725 | 1..455 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:19 Download gff for
FMO09536.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18295254..18295595 | 114..455 | 100 | | Plus |
2R | 18295085..18295197 | 1..113 | 94 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:43:06 Download gff for
FMO09536.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14182590..14182702 | 1..113 | 94 | -> | Plus |
arm_2R | 14182759..14183100 | 114..455 | 100 | | Plus |