FMO09545.5prime Sequence
398 bp (398 high quality bases) assembled on 2010-10-13
> FMO09545.5prime
CAGTCGACATGAGACGATGCAAGACAATTCAAATGCTGTTCCTCTGTTTG
ATGATGAGAATGCGAGAAAGTCATGAGCGGCCCACGCCGAAAAATCTGCT
GGAACAAATGCTGCCTGCTGACACCTTTGACGTTATCCGGAGAATACCTC
GCTCCGATGAACCCGGTCCGGATGCCAAAGGGGACCTGAAGCTGTTGCAT
GCTCCCTGCGAGTTTGACTTGATAAGATACACATCGATTAACCACTATCC
CATTTATTGCCTGCCCGTCTACACAAATCGGCACGTGAACGAGGACTGGT
ATCGACTTTATAGGACCTACGACACCGAGGGATTTGTTTTCGGGCAGTTT
TACGAGCGTCTCCAGCGGTACGAGTTGGACGCAAGCTTTCTAGACCAT
FMO09545.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:47:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34234-RA | 603 | CG34234-RA | 11..383 | 8..380 | 1865 | 100 | Plus |
Dh44-R2-RB | 3069 | CG12370-RB | 2022..2349 | 380..53 | 1640 | 100 | Minus |
Dh44-R2-RB | 3069 | CG12370-RB | 2406..2451 | 53..8 | 230 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:47:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12486939..12487266 | 380..53 | 1640 | 100 | Minus |
2R | 25286936 | 2R | 12487323..12487368 | 53..8 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:47:16 has no hits.
FMO09545.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:50 Download gff for
FMO09545.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34234-RA | 1..351 | 33..383 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:43:24 Download gff for
FMO09545.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34234-RA | 11..389 | 8..388 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:36 Download gff for
FMO09545.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34234-RA | 11..389 | 8..388 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:36 Download gff for
FMO09545.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12486933..12487265 | 54..388 | 98 | <- | Minus |
2R | 12487323..12487368 | 8..53 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:43:24 Download gff for
FMO09545.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8374438..8374770 | 54..388 | 98 | <- | Minus |
arm_2R | 8374828..8374873 | 8..53 | 100 | | Minus |