FMO09546.5prime Sequence
287 bp (287 high quality bases) assembled on 2010-10-13
> FMO09546.5prime
CAGTCGACATGTGGGGCTATCATTTGCCAATTGTGCTGCGCCCAGCCAAC
AATATGACCATCACGAGCGGAGGCAACAGCTACAGTCCTCGAAACTCCGT
GGAAAACGACGCCTGGACGCTTGGTGAATCCTCCGAGTATGGTGAATATC
CCGATGACTACGATGAAAACGATGAGGAGCACGGCGATGAGGATATTGAC
TACGTTGGCCAGGAATCCGACGATGTTTTCGAAACGGAATCTGGAGAGGC
TGCAGTTCAGGGCGCACAGGCAAGCTTTCTAGACCAT
FMO09546.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:38:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42671-RJ | 5900 | CG42671-RJ | 4478..4738 | 9..269 | 1305 | 100 | Plus |
CG42671-RH | 4879 | CG42671-RH | 4334..4594 | 9..269 | 1305 | 100 | Plus |
CG42671-RG | 4917 | CG42671-RG | 4372..4632 | 9..269 | 1305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:38:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11229113..11229350 | 32..269 | 1190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:38:24 has no hits.
FMO09546.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:29 Download gff for
FMO09546.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34240-RA | 244..511 | 1..269 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:39:00 Download gff for
FMO09546.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42671-RG | 4365..4632 | 1..269 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:28 Download gff for
FMO09546.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42671-RG | 4365..4632 | 1..269 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:28 Download gff for
FMO09546.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11229113..11229350 | 32..269 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:39:00 Download gff for
FMO09546.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11222213..11222450 | 32..269 | 100 | | Plus |