FMO09547.5prime Sequence
350 bp (350 high quality bases) assembled on 2010-10-13
> FMO09547.5prime
CAGTCGACATGATGTTCCGCTCCGTGATCCCAGTTCTCCTGTTCCTGATC
CCGCTCCTGCTATCCGCCCAGGCCGCAAACTCGCTGCGGGCTTGTGGCCC
CGCCTTGATGGACATGCTGAGGGTTGCCTGTCCCAATGGATTCAATTCAA
TGTTCGCCAAACGAGGCACCTTGGGCCTATTCGATTATGAGGACCACTTG
GCGGATTTGGATAGCTCCGAATCTCACCACATGAACTCACTGTCGAGCAT
TCGGCGCGATTTTCGCGGCGTTGTCGACTCCTGTTGCCGCAAATCGTGTT
CCTTTTCCACGTTGAGGGCATACTGCGACTCCGCAAGCTTTCTAGACCAT
FMO09547.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:37:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp5-RA | 478 | CG33273-RA | 25..348 | 9..332 | 1620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:37:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9823711..9823873 | 171..9 | 815 | 100 | Minus |
| 3L | 28110227 | 3L | 9823479..9823639 | 332..172 | 805 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:37:49 has no hits.
FMO09547.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:59:23 Download gff for
FMO09547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp5-RA | 1..324 | 12..336 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:38:40 Download gff for
FMO09547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp5-RA | 18..351 | 1..336 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:09 Download gff for
FMO09547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp5-RA | 18..351 | 1..336 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:09 Download gff for
FMO09547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9823475..9823639 | 172..336 | 98 | <- | Minus |
| 3L | 9823711..9823878 | 1..171 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:38:40 Download gff for
FMO09547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9816575..9816739 | 172..336 | 98 | <- | Minus |
| arm_3L | 9816811..9816978 | 1..171 | 97 | | Minus |
