FMO09549.5prime Sequence
764 bp (764 high quality bases) assembled on 2010-10-13
> FMO09549.5prime
CAGTCGACATGGGAGAGCGTGTTGAAAAGCGACAGAGAAAAATGGGGGGA
TGTGGATTACAGCTCGTCATACCATTGGTCACAATCCTCATCCTGGCTGC
GCAGGCGCAGGCTGTGACGTCATCGCCCGTCCTGAAGGACGACACTTTGG
GGGATGCTGCTCCGACGGCAGCGCATTCAGCAGCCAAAATCCTTGAAGAC
GTCCAAACCATCAGCGCAGTTCAGGATTGGAGTTTGCTGTGTAAAGAGCT
CTGCGGAGCTGGCCTGGGCGTTGCTTCAACGCCTGATGTGGCCAAAAACA
CAATCCTGAGACCGGAGACGGATGTGGCCAAGTGCCGGCAACTGTGTGGA
CTGCCTAGGGCTAAAGCGGGCGACTTGGTCTGCTCGAGCTTTTGTGGTCA
GATGGGTCGCTCCCTGCCCGGATGCAGTCCCTGCCAGCAGGAGGTGCGCA
GGATGAGGGTGATGAAGGAGCGGAAGCAGGAGGAGGAGAAGCAGGAGGAG
GTTCGAAAGGACGAGGAGAAGGCCAGTGGAGTGCTGGGCGATCCAACACA
CGGTTCCAGAGCCGCGGAGAATGCCGAACGGAGAGGATCGGTCGAGGAAG
CAACAGTGTCCGCAGCTACCGTGGCAGCCGCCTCGGAAACGGACACAACC
ACTCCGGCACCGGACTGGGACGAAGTGTGCAAGGTGCTCTGCAAGACTGG
CGATGGCGGGTCTTTGTGCAACTGTGATTTATCGCCGTTCTTCAGCGCAA
GCTTTCTAGACCAT
FMO09549.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:47:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14989-RE | 2917 | CG14989-RE | 132..869 | 9..746 | 3690 | 100 | Plus |
| CG14989-RD | 1508 | CG14989-RD | 127..864 | 9..746 | 3690 | 100 | Plus |
| CG14989-RC | 1111 | CG14989-RC | 132..869 | 9..746 | 3690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:47:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4090272..4090658 | 360..746 | 1935 | 100 | Plus |
| 3L | 28110227 | 3L | 4088967..4089214 | 9..256 | 1240 | 100 | Plus |
| 3L | 28110227 | 3L | 4090034..4090146 | 252..364 | 535 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:47:30 has no hits.
FMO09549.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:52 Download gff for
FMO09549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14989-RB | 1..710 | 42..752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:43:31 Download gff for
FMO09549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14989-RC | 127..874 | 1..752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:42 Download gff for
FMO09549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14989-RC | 127..874 | 1..752 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:42 Download gff for
FMO09549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4088962..4089214 | 1..256 | 98 | -> | Plus |
| 3L | 4090039..4090142 | 257..360 | 100 | -> | Plus |
| 3L | 4090273..4090663 | 361..752 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:43:31 Download gff for
FMO09549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4088962..4089214 | 1..256 | 98 | -> | Plus |
| arm_3L | 4090039..4090142 | 257..360 | 100 | -> | Plus |
| arm_3L | 4090273..4090663 | 361..752 | 99 | | Plus |
