FMO09553.5prime Sequence
1121 bp (1015 high quality bases) assembled on 2010-10-13
> FMO09553.5prime
CAGTCGACATGGACACAAAGCTCGCCTTCATTTCCGGACTCATCATGATC
CCCACGATATCAGGCGCCCTGACCTTCAATGCAACTCTAATATGTAGCTT
GGTGGTCAACGGAACCAAGATGAACGATCCTCGGGCGTGCAACGCGTGGA
TTCAGTGCATCGATGGGAGCCCTGTGAGTGGTAGCTGTGCGACTGGACTC
TTCTACGACCGGGAGAGCCAGAAATGCCTGAGTTCCAGTAGTATCAAGTG
TCTGTCCAGTGATCCGTGCGCTGCTCTGCCCACCGGATTCGCGGCTGATC
CGTACTCCTGCAATGGTTATTACTATTGCAAGGATGGCAAGGGGACGCAC
GGAGTGTGCAACACTGGGATGAATTTCAATTCGGGAACGCAGGACTGCAT
CCGCGATTTTCCGTGCTCGAATAAAATGGACCCGGATAGCTATTGCAACA
TCTTGCCGGATGGGGTCTTCGTCAAGGACACGGACAACTGCAATGGCTAT
CAGTTGTGCTGGGATGGCCAGGTGATCAATGGAACCTGTCCGGGCACCTT
CTACTTCAAGGCCTCCACGGCCCAGTGCGATTATCCGCAGAATGTGGAGT
GTGACTTCGTCCCAGTGCCAGATATTAGCAAGAAGGGTGTATGTCCAGAG
ACGGGTGGATTTATATCGGATAACAAGACCTGCAATGGCTACTACTACTG
CAAGGATTTGGGCAATGGAGAGTTCTCGCTGGAGCATGGCGTCTGCTCCG
ATGGAAGATTTTTCCTGGCCACCGATGGCGGAGCCTGTGTCCCGCGATCC
AAGGTGAAATGCGGCTACGATCGATGCGTGGGCTTGGGCAATTCCACCAT
TCAGCTGGCCAACGAGTCGGATGATGGCTGCAGGGGCTACTCGATCTGCC
AGGATGGCATCGTCATTGGCCAAGGAACTTGTCCGCAGGACGAGTACTTC
GACGAAATAACCCAACGGTGCACCACCCAAGGTCATATCATATACCGCCT
GTTCAGAAATCGGAGGCAACTACCGGGTTCCCAAGTTCCAAGTGGTAACA
CCACCCACCCACCAGCAGCACCATCACTAGCACCACCATGGCGGTCCGTG
GGTCGGCAAGCTTTCTGAACA
FMO09553.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:47:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6996-RC | 1828 | CG6996-RC | 87..1175 | 4..1097 | 5255 | 99 | Plus |
| CG6996-RB | 1377 | CG6996-RB | 87..1175 | 4..1097 | 5255 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:47:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20207867..20208947 | 12..1097 | 5125 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:47:49 has no hits.
FMO09553.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:55 Download gff for
FMO09553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6996-RA | 1..1059 | 45..1108 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:43:39 Download gff for
FMO09553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6996-RB | 84..1183 | 1..1105 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:48 Download gff for
FMO09553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6996-RB | 84..1183 | 1..1105 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:48 Download gff for
FMO09553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20207864..20208955 | 7..1105 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:43:39 Download gff for
FMO09553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20200964..20202055 | 7..1105 | 98 | | Plus |
