FMO09559.5prime Sequence
401 bp (401 high quality bases) assembled on 2010-10-13
> FMO09559.5prime
CAGTCGACATGTACAATAGTTTATATTTATATCGAAATCTGTGCAAAATG
TCGTTTGTTCCAGAGACTTTTATTATTTATGGCTTTTTATGGAGCTTGGT
GGTTTTCCCAGCTTTCGCTAATTTTTCCCTCTACAACTACGGGGATTCAG
CCTATCCCAATTGCTGTGTTCTCGATATTGACTCAACGCGGATACTGCTT
AAAATGGGTCAGAAATTTCGCCCAAAATTCCTGCCCTGCACGACAATTTT
ATGCATTGGCGATGGATATGGAATGCTGTTTACGTGTGATAAAAAGGAAC
CACCAGAGCACTGTCACTTTAAGGATTATTTGAATGGGGATGCCAATTAT
CCAGATTGTTGCTACCGCAAACTTGAGTGCGACGCAAGCTTTCTAGACCA
T
FMO09559.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:47:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34178-RC | 492 | CG34178-RC | 14..388 | 9..383 | 1875 | 100 | Plus |
CG34178-RB | 940 | CG34178-RB | 462..836 | 9..383 | 1875 | 100 | Plus |
CG34178-RA | 882 | CG34178-RA | 404..778 | 9..383 | 1875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:47:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4434428..4434569 | 9..150 | 710 | 100 | Plus |
2L | 23513712 | 2L | 4434616..4434755 | 146..285 | 700 | 100 | Plus |
2L | 23513712 | 2L | 4434854..4434953 | 284..383 | 500 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:47:23 has no hits.
FMO09559.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:51 Download gff for
FMO09559.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34178-RA | 397..790 | 1..396 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:43:28 Download gff for
FMO09559.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34178-RA | 397..790 | 1..396 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:39 Download gff for
FMO09559.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34178-RA | 397..790 | 1..396 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:39 Download gff for
FMO09559.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4434421..4434569 | 1..150 | 97 | -> | Plus |
2L | 4434621..4434753 | 151..283 | 100 | -> | Plus |
2L | 4434854..4434965 | 284..396 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:43:28 Download gff for
FMO09559.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4434421..4434569 | 1..150 | 97 | -> | Plus |
arm_2L | 4434621..4434753 | 151..283 | 100 | -> | Plus |
arm_2L | 4434854..4434965 | 284..396 | 96 | | Plus |