FMO09560.5prime Sequence
595 bp (440 high quality bases) assembled on 2010-10-13
> FMO09560.5prime
CAGTCGACATGCCTTTCCGGGCCGAACACAAGGCAGAGGACGAGAAGGTG
CAGATCACAGGTCCGGAGGACAACCAACACCAACAAAACAACAACAACAA
CGATTGGGAGCCGAACAGGATGGTGCTACCGTTTGGACTTGGACCCGATG
GCCATCACGTGGATGCCATTCAGAGTGCTCCGGCGCCCAGTGCGCCCCCC
GCCCACATGATGCCACCAGCCTACGCCCGGGGACAAACAAACATATACAC
AGGTGTTCCGATCATCGTGAATCCCTACATAGACTTCATCGTGGTCAACG
GGGATGATCGATACATGATCAGATGCGAACGAAAGTCGGTACTCGAGCGG
AGCGTGGAGCTGGCCAAGCTTATCCTCTTTCTGTCCGAACAGCGGTCGCA
AGAGCGACAATCATTTCCAGATACTCAACGTGGACAAGAACGACTTTGTG
CTGATCGTCCGCTACATGGAGAAGCACTTCATTCCCTACCGCGATCACAA
GCACCTGCTCAGATACTGGAGCTTTCCGATCGCTTCAACGTTCCAGTATC
TGATAATCTTACTTGCATTCGCGAACCTTGATTCTCAGAATTCCT
FMO09560.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:47:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8398-RE | 1911 | CG8398-RE | 329..884 | 31..591 | 2530 | 97.5 | Plus |
CG8398-RD | 2094 | CG8398-RD | 512..1067 | 31..591 | 2530 | 97.5 | Plus |
CG8398-RC | 1850 | CG8398-RC | 268..823 | 31..591 | 2530 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:47:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6616076..6616591 | 31..546 | 2380 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:47:27 has no hits.
FMO09560.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:52 Download gff for
FMO09560.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8398-RD | 766..1321 | 33..595 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:43:29 Download gff for
FMO09560.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8398-RC | 268..825 | 31..595 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:41 Download gff for
FMO09560.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8398-RC | 268..825 | 31..595 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:41 Download gff for
FMO09560.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6616078..6616596 | 33..552 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:43:29 Download gff for
FMO09560.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6609178..6609696 | 33..552 | 98 | -> | Plus |