FMO09561.5prime Sequence
1004 bp (1004 high quality bases) assembled on 2010-10-13
> FMO09561.5prime
CAGTCGACATGCCCCCACTTGAATTAAACATGAATTTGGCCCTAAATAAG
ACTTTCCAGAAGCGTGGATGTCAAATTCTTGGCCTCAACAAGTACGGTAT
ACAGCAGTGGCTGAAGACAATCGACACGATCATATTCGATGGAAACGGTG
TCCTGTGGAGCCACGGCAAGGTCCTTGAAAATGCAGCCGAGACGTTTAAC
GCACTGCGTGCCATGGGAAAGAAGGCCTTTATTTGCACCAATAACTCAGT
GACTTCGGTCGAGGGCATCTGCAAGTATGCCCAGGAAATGGGTTTCTTGG
TGGCCAAGAATGAGATCCTTTCCTCGGTCCAAACTTTAGCCAAATTTATG
AAGGAGAAAAAGTTTAAGAAAAAGTGCTACGTAGTGGGCGGCCAGGGAAT
CGTCGACGAATTAAAGTTGGTAGGAATCGAGTCCCTGCCCTTGGATCATT
CCTCTCTGCAGGGCTTCTCTATGCCAGATCACATCCACAGTATCTACTTG
GATCCCAATGTGGGTGCTGTGGTCGTGGGATCTGACAAGGATTTTAATAC
AATCAAGCTGACAAAGGCGTGTTGCTATCTCAGAGACAGCGAGGTAATGT
TTGTGGCCACAAGTCGCGATGCGGCACTTCCGGCGGCTCCAGGACGAATG
GTTCCTTCCGCCGGAGTGATGGTGGCTGCCATTCAGGCGGCCAGTCAACG
TATGCCCTTCACTTGTGGAAAACCCAATCCGTACATGTGCATCGACTTGA
TGCAAAAGGGAGTTATTCAGCCGGACAGGACTTTGATTATAGGAGACACC
ATGTGCACAGATATCCTTTTGGGCTACAAGTGTGGCTTTCAAACCCTTTT
GGTGGGGCACGGGGGTTAACAGCTATCAGGATGCCATTGAAGCTCAGGAT
CTAAGCTCCATTACTATATCAGCAAGTTCCTGATCTATATATGCCCAAAC
TATCCAATCTGTTGCCATTTTATCTTCTCGAAATAGAGCAGCTTTCTAGA
CAAT
FMO09561.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:48:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32487-RA | 1040 | CG32487-RA | 24..1001 | 12..987 | 4675 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3016446..3017233 | 799..12 | 3925 | 99.9 | Minus |
| 3L | 28110227 | 3L | 3016189..3016382 | 987..796 | 655 | 93.8 | Minus |
Blast to na_te.dros performed 2014-11-26 14:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 5302..5334 | 340..372 | 111 | 81.8 | Plus |
FMO09561.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:00 Download gff for
FMO09561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32487-RA | 1..963 | 30..990 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:43:55 Download gff for
FMO09561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32487-RA | 17..1007 | 1..995 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:01 Download gff for
FMO09561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32487-RA | 17..1007 | 1..995 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:01 Download gff for
FMO09561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3016183..3016378 | 800..995 | 92 | <- | Minus |
| 3L | 3016446..3017240 | 1..799 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:43:55 Download gff for
FMO09561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3016183..3016378 | 800..995 | 92 | <- | Minus |
| arm_3L | 3016446..3017240 | 1..799 | 99 | | Minus |
