FMO09564.5prime Sequence
1120 bp (1017 high quality bases) assembled on 2010-10-13
> FMO09564.5prime
CAGTCGACATGAGAACAATGTCAACGCGGATTTTGAGCCACAGCGCAGTC
CGACTTTCATTACTGGCAATGGCAATCCTGGCGAGCGTTGGACAAGCGAC
CGACCGATCCGAAGGAAGATCAGTACGCAGGTACTCATATGCGGATACCT
CGTGGCCCAGGCGGCCGTTCGGCAGCGAGCGAAGGGACTTGGCGCCGTCG
GAGCAGCGATACTTCTCCGATCCGGAACTGCTCTTCCAGCGGCTGGACGA
CATGGAGCAGAAATTGGGAATTCCAGAAAAAATGGCTGCTGCTGGCAAGG
TGAAATCGGAACACTATCTGGTTGGTCCCACGAATGTTGCCGCCCAGATG
CTCAAAGATAACTTGTACAAATTTCCGATTGATGACGGCGCCATTGGACA
GGGAATGCACGATGATTGTCTGGGTAAGGAGGATGTGGATGATCCCTTCG
AGTCCCTGGCCAGGATGAACTTCAATGAGCATTTGAATGAGCGTAAGTCC
GATCGTGAGCTCAAGAGGGTGCTGGGTGGCTACTTAAACGACCAGCAGCT
GGATGGAAAACCAGCTGTGGCAACAGCCAATTTGCTGGCCAAGGTCATTA
GCTCCAAGGTCGATCAGCCCAGGAAGTCTGGGCCTTGTCGTGGCACCACG
GCTCGATCCCACGGGTTCACCACAAGAAGCCCTACGACTCATCGGACGAC
CCTTAGTACCACAACGCGCAGTCCCACCACTTTCTGCCTTCCGGAACCCT
CATCCGATCCTCCGCTCAAGCCGCTTCCCACATCTCCACCAACACCTCGT
CCTCCGCCTTCCGCACCTTCGCGTCCACCAACGACGCGAAAGCCATCTGC
TCAAAGGATTAAGCCCAGTAATAAGTGCCCCATATCGACGAATCTCAAAA
GCTAGGAGTGCCAGGTGCTGCTGGAAATCATTTTGGCCACCAAGCAGCAT
GCCCTTATCGGTGCTCAGGATCCTCACTACCTGGATTGGAACTGCTAAGT
CCCCTCCACGGACGACGATGTTATCGGAGACCACGTTAAGGAAAGACCAC
CACAAGACGTCTGACGTATCGAATCGAGCCAGCACCATCCAGGGTATTTC
TTGATCGACAGCAGCCAAAA
FMO09564.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:48:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13871-RA | 1717 | CG13871-RA | 26..1132 | 9..1099 | 4920 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:48:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20317348..20318363 | 9..1021 | 4650 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:48:33 has no hits.
FMO09564.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:01 Download gff for
FMO09564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13871-RA | 1..1047 | 69..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:01 Download gff for
FMO09564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13871-RA | 26..1132 | 9..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:07 Download gff for
FMO09564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13871-RA | 26..1132 | 9..1099 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:07 Download gff for
FMO09564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20317348..20318454 | 9..1099 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:01 Download gff for
FMO09564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16204853..16205959 | 9..1099 | 97 | | Plus |
