FMO09565.5prime Sequence
927 bp (927 high quality bases) assembled on 2010-10-13
> FMO09565.5prime
CAGTCGACATGATCAGCCCGGTAATAACTCGACAAATGGTGCAAATCCTG
CCAAGTGTTATGGTCGGTAGGATAACACTTCCCGATATTATTGAGGATGC
AATCAAGCCCCCAACGGAAGATATTAATTTCGAAGAAAAATCGAATGAGA
ATGAGGTGGAAGATAATACAGAGAAATCGGAAGCGGTTTCTGAATCCGAA
AAAGAGGTAATTGAGGTATCTGAGGAGCCGAAGGAAGAAGAGGTAAAGTA
CGCTTGGAATGCACCCTGCATGATGGTCATCTTCGAGGATGGCGATGTCA
ATTGTGCCCTGCATCACCTGGTCGAATCTCTACAGGATCCCTTTGCCTTA
GATGCGGTTGCCGTGATCTTGGTACAAGAAGCTTTAGCCGAAGAAATCGA
AAACCGAGTAAAAATTCTGATGAAACCCTTGGATGCCAGGGTGGCCAATC
ATCCGTGCTACAAGCGCACTCTGATGAAGATTGACGAACTTAGGCCGAAA
ACTATAATAGGTCCTTCAGATCGTGTCTTACCCGATGCCACGCCCATAAT
GGTGCGGGACATACCACACAAATTTCTGGGCGATGGACCCACTGGCATTA
TAACCATGCATATTTTTCGCACCCCTTTCGAAGCCACTCAGATATATAGA
AAGGAATATCCCCTACCAATCGCATCGGTTAGTATATGGAATGAGCGGGT
TTCGAGTGTTTACGATGTAATTGGCATGATGAATCTACTCGATACCTTTA
AGATCAACTGTTTCACGGTCGATATGGAGCCCATTAAGCGGGCATTCGAG
CTAAGGAAGTATAGTGCTTGTATACATCGTGGTTATCACTATGAAACCCT
GCCCATAAATGGCGAGAGAAAGATTATCATATATCCAGTTGGAACTATAT
TTGGCAATGCAAGCTTTTCTAGACCAT
FMO09565.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:48:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12516-RB | 975 | CG12516-RB | 39..938 | 9..908 | 4500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:48:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28303668..28304567 | 908..9 | 4500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:48:36 has no hits.
FMO09565.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:02 Download gff for
FMO09565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12516-RA | 1..876 | 36..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:02 Download gff for
FMO09565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12516-RB | 35..943 | 1..913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:09 Download gff for
FMO09565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12516-RB | 35..943 | 1..913 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:09 Download gff for
FMO09565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28303663..28304571 | 1..913 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:02 Download gff for
FMO09565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24129385..24130293 | 1..913 | 99 | | Minus |
