FMO09571.5prime Sequence
1164 bp (1008 high quality bases) assembled on 2010-10-13
> FMO09571.5prime
CAGTCGACATGGGGTTTTTTTTGTTTAAAAACATAGTTCGCAATTCTGAT
AAATTATTCGGAAATAAAACTCCAACTAGAGTTTCGCTATTGTCCAGATT
TTGTGGCACTTCCTTGGCTGGTAAAATGGAGAAGGTTTATTTGAGAAATG
CAAGTGATACCAAAGAATTGGACATTGTGTTTCGCTTTGTGAATGAGAAT
TTGAAAATAAACCGGGAATTCAATTTCCGTCGCCAGATGAATGAGCCCAT
TGATGCGATATTGGCCAGGATTCAGAGTAATATTATTGGCAGGCTTGCAA
AGTCCTGCAAAAAATCAAAAATCAAACCGCCGGCAGAAATCAATGTTAAA
CTTCTGAGTGACAAATATGGTGAAAAATTCAATGAATTAACATTTGAGGA
TCTAGTCGTCACCCAAGATATCAGCAATGTAAAACTGCAGGTATTAGATA
CGGTCTACGATTTGGTGTTCAATCCACCGTGGATTTCATCCCTAAAATTT
TTGCCCTCATGCATATTGGCAGGATTTGTAATATACCCCACCAATGTTCA
GATACAATTCGGAGAACGTCAGTTCAGCAAAGCAGTTTGGTTCAAGGCCA
AAAAGCCCACAGACACCGATTGGGAGGTGTGCGGAGAAGGATTTCAATAT
CTAGTGACTCCTGAGGATATTGGTTACCATTTGAAGTTCGTGGTGACGCC
GGGTAATGCACTGGGAATGACGGGTCCTGTGGTGGAGAAGATAACCAACT
CTGCAGTGCAGGAATCTCCCGGGCGTTGTCCATTCCAAGATCGCCAAAGG
CACACCACGAATTCTTTGAGCGAATCGAATGAAATTCGTGTTGTTGTCTT
ACAATTTGTTGGTCGATTTATATGCCAGTAGTGACTATGCCGGTAGCACT
CTGTTCTCTATTGCCCGGCAAAGTATCTGCAAATAGACTATAGGAAGCCA
CTGTTCATCAACGAGATCATCGGTTATACTTCCGATATTCTCTGTCTCAG
AAGTCGATCAGCGATATTTGATTTTGATTTAAAGGAAATTCCTAGACCAC
CGCCGTATAACTATCACGGCATAAATGTCCCGAATGCAAATGCCTCTGAG
GGAGTGGCATTTTCTTTCGAACTCGCGCCTTCGATTCCTTTGCAATCTCC
CAAATCTGGCATTT
FMO09571.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:48:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31759-RD | 2242 | CG31759-RD | 333..1463 | 9..1135 | 5225 | 98.1 | Plus |
| CG31759-RC | 2192 | CG31759-RC | 181..1311 | 9..1135 | 5225 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12208099..12209206 | 9..1113 | 5015 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:48:14 has no hits.
FMO09571.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:00:58 Download gff for
FMO09571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31759-RD | 410..1550 | 1..1140 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:43:50 Download gff for
FMO09571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31759-RC | 176..1316 | 1..1140 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:57 Download gff for
FMO09571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31759-RC | 176..1316 | 1..1140 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:57 Download gff for
FMO09571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12208094..12209234 | 1..1140 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:43:50 Download gff for
FMO09571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12208094..12209234 | 1..1140 | 97 | | Plus |
