FMO09575.5prime Sequence
395 bp (262 high quality bases) assembled on 2010-10-13
> FMO09575.5prime
CAATCGACATGCCAGGGAGGCCAGAAAAGCCCATGGAGCTAATTAAGCCG
CCTCGCATGAATGCTGTGTGGTTTTCCACGGGGCCAGAGGTTGAGGGTGG
CTCTGCATCAAGGGAAAGCACTAACTGCAACATCAACATCAACAGCAACA
TTAGCAACAAGAGCAACAAAGATGAGAAATCGCTGGCTTCCTGGCTTCAT
GAAGAAATAAGTCTAGATTGCCAGTTGGGGAAAAACTTGTTCATCTTTGG
CTCTAACGAGCTAACGGAGCGACAAGCGGACAAGCGGACAAACAGCGGAC
CAACCGAACTGATGGGCGGACATTCCGGCGGACGGACGGACAACTGTGAG
CGATTCCACACAAAACAAGACGATGGGGCAAGCTTTCTATACCAT
FMO09575.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:49:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33284-RA | 1132 | CG33284-RA | 539..907 | 9..377 | 1815 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:49:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21124291..21124659 | 9..377 | 1815 | 99.5 | Plus |
Blast to na_te.dros performed 2014-11-26 14:49:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2358..2445 | 103..190 | 161 | 67.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6837 | 103..168 | 149 | 74.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2356..2408 | 117..169 | 148 | 75.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6848..6954 | 103..213 | 139 | 62.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6846 | 103..168 | 138 | 69.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2362..2413 | 117..168 | 134 | 73.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6793 | 103..169 | 133 | 68.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6746..6813 | 103..168 | 128 | 67.6 | Plus |
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 1254..1316 | 280..342 | 125 | 70.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6772 | 115..169 | 122 | 69.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2290..2359 | 95..168 | 117 | 66.2 | Plus |
FMO09575.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:08 Download gff for
FMO09575.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 1..348 | 33..381 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:21 Download gff for
FMO09575.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 534..910 | 1..381 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:23 Download gff for
FMO09575.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 534..910 | 1..381 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:23 Download gff for
FMO09575.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21124286..21124662 | 1..381 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:21 Download gff for
FMO09575.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21117386..21117762 | 1..381 | 97 | | Plus |