FMO09576.5prime Sequence
942 bp (942 high quality bases) assembled on 2010-10-13
> FMO09576.5prime
CAGTCGACATGAAGTGTAATTTTAAGGTGGCCCGGCTGAGGGGTTTTAGT
TTCGATTGTACCGCGCATATACCAACCATGACAAATAGGTGGAATCTTAC
GGTGCTGCTGGGTCTGACTCTGCTGGCTCTTCAGGGGCCAACGGAAGCCA
TGAGGATGCGAGGAGAACCACTTCCGGGTTTGGCCAATATCGAGAGGCAT
CGCTCCACCGAAGCTGTGCCCCAAGGTCGTGTGATCGGTGGCACCACCGC
CGCCGAGGGCAACTGGCCCTGGATAGCAAGTATCCAAAATGCATACTCGT
ATCACTTGTGCGGAGCCATCATACTCGACGAAACTTGGGTGCTCACAGCG
GCCAGTTGCGTGGCGGGATTGAGGCCATTAAATCTGCTGGTTGTGACTGG
AACTGTGGACTGGTGGGATCTGTATGCTCCGTACTACACTGTGAGCCAGA
TCCATGTGCACTGCAACTTCGACAAGCCGCTGTATCACAATGACATAGCC
CTGCTGCAGTTGTCGTCCAAAATCGAGTTCAACGATGTGACAAAGAATAT
AACCTTGGCGGATATCGATGAATTGGAAGAGGGGGATAAGTTGACCTTTG
CCGGTTGGGGCAGCTCCGAGGCCATGGGCACCTATGGTCGCTATCTGCAG
GAGGCATCCGGCACATATCTGCCGGTGGACGCATGCCGGGAGAAGTTGCA
GAAACCAAGATGATGTGGACCTGGGTCATGTGTGTGTCCAAATGGACGCG
GGCCAGGGCGCCTGCCATGGCGACACTGGCGGACCGCTTATCGATGAGCA
GCAGCGCTTGGTAGGCATCGGTAATTGGGGTGTGCCATGCGGACGTGGCT
ATCCGGATGTGTATGCGCGTACTGCCTTCTACCACGATTGGATCCGCACC
ACCATGAATGGATGTACGATCGCCGCAAGCTTTCTAGACCAT
FMO09576.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:49:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31266-RB | 993 | CG31266-RB | 1..869 | 55..924 | 4325 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:49:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17132616..17133462 | 9..856 | 4190 | 99.9 | Plus |
| 3R | 32079331 | 3R | 17133526..17133595 | 855..924 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:49:23 has no hits.
FMO09576.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:09 Download gff for
FMO09576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31266-RB | 1356..2277 | 1..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:24 Download gff for
FMO09576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31266-RB | 1..869 | 55..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:25 Download gff for
FMO09576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31266-RB | 1..869 | 55..924 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:25 Download gff for
FMO09576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17132609..17133461 | 1..855 | 99 | -> | Plus |
| 3R | 17133527..17133595 | 856..924 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:24 Download gff for
FMO09576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12959249..12959317 | 856..924 | 100 | | Plus |
| arm_3R | 12958331..12959183 | 1..855 | 99 | -> | Plus |
