FMO09577.5prime Sequence
344 bp (344 high quality bases) assembled on 2010-10-13
> FMO09577.5prime
CAGTCGACATGTACGTTTTGATTTTGGAATACTTTTATGTAATGGTGAAA
GTGGAGGTGGAATACTGCGGCATCTGCAACTTTAGCGGGCAGTGCCACCT
GCTGCGCGAGTTCCTGCTGGCCTCGTCGCCCGACTTGGACATATCCTGTC
GCACGGGACGGCGGGGATCCTTCGAGGTGTCCATCGACGGTCAGCTAGTG
CACTCGAAGCTTTCCTGCCTGGCATTTCCCCAGCACGCGAGTGTCCTGGC
CCAAGTGCAGAAGGCGGAGCGTGGAGAGCCCGTGGAGAAAGTCCTGGAGC
AGCCCATCAAGGACTGCGTCGTGATGGCAAGCTTTCTAGACCAT
FMO09577.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:49:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15456-RB | 500 | CG15456-RB | 20..337 | 9..326 | 1590 | 100 | Plus |
| CG15456-RA | 477 | CG15456-RA | 20..337 | 9..326 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:49:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20426649..20426908 | 326..67 | 1300 | 100 | Minus |
| X | 23542271 | X | 20426965..20427023 | 67..9 | 295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:49:27 has no hits.
FMO09577.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:09 Download gff for
FMO09577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15456-RA | 1..288 | 42..329 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:25 Download gff for
FMO09577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15456-RA | 20..343 | 9..333 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:27 Download gff for
FMO09577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15456-RA | 20..343 | 9..333 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:27 Download gff for
FMO09577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20426965..20427023 | 9..67 | 100 | | Minus |
| X | 20426643..20426907 | 68..333 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:25 Download gff for
FMO09577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20297670..20297934 | 68..333 | 98 | <- | Minus |
| arm_X | 20297992..20298050 | 9..67 | 100 | | Minus |
