Clone FMO09582 Report

Search the DGRC for FMO09582

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:95
Well:82
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31950-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09582.5prime Sequence

389 bp (389 high quality bases) assembled on 2010-10-13

> FMO09582.5prime
CAGTCGACATGACAGAACTGAGCATCACTGGCCAACAGGTGATGCCTCCG
CCCGCTTGTACACCCCCGGAGCCCTTCCGCATCACAACGAACGCCCCGCA
CCAGATGAACGATGCCAGTTTGACGCCGGGACGCAGGAAGCTCCAGAAGT
GGCTGGGTCGAGTTCTGCGGATCGTGATTACGGACGGACGCGTGCTGGTG
GGATTCTTCAACTGCACGGACCGCGACGCCAACATCGTGCTGTCCATGTG
CGCCGAGTACTTGGTGGAGGGCCAGGAGCCGCGCCTGCTGGGCAACGTCA
TGGTTCCCGGCCAGCACATAGTCTCCCTAAGCATCGACGAGCCGGATCCG
CAGTCCAGCCTGCTGGTGCAAGCAAGCTTTCTAGACCAT

FMO09582.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:48:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG31950-RB 658 CG31950-RB 249..612 8..371 1730 98.4 Plus
CG31950-RA 482 CG31950-RA 73..436 8..371 1730 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:48:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2878592..2878955 8..371 1730 98.4 Plus
Blast to na_te.dros performed on 2014-11-26 14:48:58 has no hits.

FMO09582.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:05 Download gff for FMO09582.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31950-RA 1..366 9..372 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:12 Download gff for FMO09582.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31950-RA 73..436 8..371 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:16 Download gff for FMO09582.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31950-RA 73..436 8..371 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:16 Download gff for FMO09582.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2878592..2878955 8..371 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:12 Download gff for FMO09582.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2878592..2878955 8..371 98   Plus