Clone FMO09583 Report

Search the DGRC for FMO09583

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:95
Well:83
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34164-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09583.5prime Sequence

344 bp (344 high quality bases) assembled on 2010-10-13

> FMO09583.5prime
CAGTCGACATGAATTCAAGTTTCAACAGCGAGCAGTTGGACACCGACCGC
GATGGACTGCAAAAAATTCTGGCCCGATCTCTCAAGGAACCCATTCTTGG
CAAGCACTTTGCCCTGCCTGGCCGCATAGAGCAGAGTCCACCCATCGAAC
TGGACACCAGCCAGAGCTACATTGCCGTCTACACTCATCTCAAAGTGCAC
GCCACCATGATGCCGGAGAGATTGCCCACGCCGGAGGCAATCGGACGAAT
ACAGGCGGAGAACTTGGAGGCAGCGCCCAAGGCACGAAGTTCAAAGACCC
GCTTGGATCCCTGCTCAAATATAAATGCAAGCTTTCTAGACCAT

FMO09583.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:49:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG34164-RC 474 CG34164-RC 116..433 9..326 1590 100 Plus
CG34164-RB 1771 CG34164-RB 1413..1730 9..326 1590 100 Plus
RpL7-like-RB 1771 CG5317-RB 1413..1730 9..326 1590 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12057893..12058210 9..326 1590 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:49:02 has no hits.

FMO09583.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:05 Download gff for FMO09583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5317-RB 1433..1760 1..334 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:13 Download gff for FMO09583.5prime
Subject Subject Range Query Range Percent Splice Strand
RpL7-like-RB 1409..1736 1..334 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:18 Download gff for FMO09583.5prime
Subject Subject Range Query Range Percent Splice Strand
RpL7-like-RB 1409..1736 1..334 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:18 Download gff for FMO09583.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 12057889..12058216 1..334 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:13 Download gff for FMO09583.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12057889..12058216 1..334 97   Plus