Clone FMO09584 Report

Search the DGRC for FMO09584

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:95
Well:84
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13043-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09584.5prime Sequence

470 bp (470 high quality bases) assembled on 2010-10-13

> FMO09584.5prime
CAGTCGACATGTTCAAGTTGGTGGTATTGTCTGCTCTGCTCGCTGTAGCC
GCTGCCCGTCCCGGTCACCTGTTGGAGTCCTCCCCGCTGGTCTACGCTGC
CCCAGCAGCGACGACCATCGTCCAGGAGCCCGTTCTGGCCAAGGTGGGAG
CCGTGGTCAAGAGCGTACCCACTGCCGTCAGCCACCAGAGCCAGTCGGTG
GTGCACAGTCACGCTCATGTTGTCGAGGATGTCGTTGCTCCCGTGGTGAA
GTCCACTCCGGTGGTCAGCTATGCTGCTGCCGCTCCAGTGGTTCACACCT
CCTATGCCGCTGCTCCCGTTGTCCACACCAGTTACGCTGCTCCTGCTCCC
GTTGTTCACACATCCTACGCCGCCGCCGCTCCCGTTCTGGCCACATCCTA
CGCCCAAGTGGCCGCCTCCTCGCCGCTGACCTACACCGCCACTGGTGTGT
GGGCAAGCTTTCTAGACCAT

FMO09584.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:49:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG13043-RA 646 CG13043-RA 80..523 9..452 2220 100 Plus
CG13063-RA 544 CG13063-RA 46..416 7..386 740 80.5 Plus
CG13044-RA 624 CG13044-RA 168..307 114..256 290 81.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:49:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16305348..16305791 452..9 2220 100 Minus
3L 28110227 3L 16306720..16307028 20..331 655 81.4 Plus
3L 28110227 3L 16302807..16302946 256..114 245 79.7 Minus
Blast to na_te.dros performed on 2014-11-26 14:49:06 has no hits.

FMO09584.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:06 Download gff for FMO09584.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13043-RA 76..522 9..456 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:15 Download gff for FMO09584.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13043-RA 80..526 9..456 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:19 Download gff for FMO09584.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13043-RA 80..526 9..456 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:19 Download gff for FMO09584.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16305344..16305791 9..456 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:15 Download gff for FMO09584.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16298444..16298891 9..456 99   Minus