Clone FMO09586 Report

Search the DGRC for FMO09586

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:95
Well:86
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10039-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09586.5prime Sequence

251 bp (251 high quality bases) assembled on 2010-10-13

> FMO09586.5prime
CAGTCGACATGTCCGACATCAATATCAACCTCAAGTGCGCCGAGTGCAAC
CATCCTCGAGGAGTCCTGTACTATGCAAATCCCCTGGCTTGGGGCCGTCC
TTGTCGCCAGTGCCGCAGGATGATGTCCCGAAATGTTGTGGTTGTTCCCA
CTCAGGTTGCAGTTCCAGTTGCTACCAACAACAACATCACCACCACTACT
ACATTTGTACCAGTCGCTGCTGTGTCCACCCAAGCAAGCTTTCTAGACCA
T

FMO09586.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG43773-RA 295 CG43773-RA 13..238 8..233 1130 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4007702..4007927 8..233 1130 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:50:00 has no hits.

FMO09586.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:15 Download gff for FMO09586.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10039-RB 7..241 1..237 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:44 Download gff for FMO09586.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43773-RA 7..241 1..237 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:42 Download gff for FMO09586.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43773-RA 7..241 1..237 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:42 Download gff for FMO09586.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 4007696..4007930 1..237 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:44 Download gff for FMO09586.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4007696..4007930 1..237 97   Plus