FMO09588.5prime Sequence
263 bp (263 high quality bases) assembled on 2010-10-13
> FMO09588.5prime
CAGTCGACATGAATCCCAAGAGCGAAGTCCTCATTGCAGCCGTGCTCTTC
ATGCTGCTGGCCTGCGTCCAGTGTCAATTGACCTTCTCGCCGGATTGGGG
CAAGCGTTCGGTGGGCGGAGCTGGTCCTGGAACCTTTTTCGAGACACAGC
AGGGCAACTGCAAGACCTCCAACGAAATGCTGCTCGAGATCTTCCGCTTC
GTGCAATCTCAGGCACAGCTCTTTCTGGACTGCAAGCACCGCGAGGCAAG
CTTTCTAGACCAT
FMO09588.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Akh-RA | 536 | CG1171-RA | 120..356 | 9..245 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4141723..4141890 | 78..245 | 840 | 100 | Plus |
| 3L | 28110227 | 3L | 4141586..4141658 | 9..81 | 350 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:50:09 has no hits.
FMO09588.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:16 Download gff for
FMO09588.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Akh-RA | 1..240 | 9..246 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:47 Download gff for
FMO09588.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Akh-RA | 112..356 | 1..245 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:46 Download gff for
FMO09588.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Akh-RA | 112..356 | 1..245 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:46 Download gff for
FMO09588.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4141578..4141654 | 1..77 | 94 | -> | Plus |
| 3L | 4141723..4141890 | 78..245 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:47 Download gff for
FMO09588.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4141578..4141654 | 1..77 | 94 | -> | Plus |
| arm_3L | 4141723..4141890 | 78..245 | 100 | | Plus |
