FMO09591.5prime Sequence
458 bp (458 high quality bases) assembled on 2010-10-13
> FMO09591.5prime
CAGTCGACATGTGGAAGCTGGACACCAAAGGAGGAATCATCTGCTCGGGC
TGCCTGTCCATAGCCTTTGCCATAACCTATCTGGTTTTGATGGACGATTA
CTTCTGGAAATATGGACTCTACGAGATGGGAATACACATTTCGGCGCTGC
AGATCTTGGGAAGCGTGGTCCTCATCGTTGGAGCCATAAAGCAAAAGCAC
AAGTTCTTCGTGCCGTGGATGATAACCACAGGATTCTTTTTATACCTGAT
GGTGAACCTGTTCATTTCACTGATAGTCCAGGGCACAGCTTGGATCTTCG
GACCATTGATGGTCGTTCCGTTCACAGCCTATCTGGGCTGCGCCCTGTAC
TCGGTGCAGATGTGCTTCGACAGGATGCGCAAGGAGGAGCCACCGGCATA
TGCCAGCTTGTCCGACAAGAAGGAGTTCATCAATCACATAGCAAGCTTTC
TAGACCAT
FMO09591.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12825-RA | 585 | CG12825-RA | 49..482 | 7..440 | 2125 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7789570..7789712 | 185..327 | 700 | 99.3 | Plus |
2R | 25286936 | 2R | 7789770..7789885 | 325..440 | 535 | 97.4 | Plus |
2R | 25286936 | 2R | 7789254..7789358 | 7..111 | 525 | 100 | Plus |
2R | 25286936 | 2R | 7789421..7789500 | 112..191 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:50:19 has no hits.
FMO09591.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:17 Download gff for
FMO09591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12825-RA | 41..474 | 7..440 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:53 Download gff for
FMO09591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12825-RA | 49..482 | 7..440 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:52 Download gff for
FMO09591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12825-RA | 49..482 | 7..440 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:52 Download gff for
FMO09591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7789254..7789358 | 7..111 | 100 | -> | Plus |
2R | 7789421..7789500 | 112..191 | 100 | -> | Plus |
2R | 7789577..7789712 | 192..327 | 100 | -> | Plus |
2R | 7789773..7789885 | 328..440 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:53 Download gff for
FMO09591.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3676759..3676863 | 7..111 | 100 | -> | Plus |
arm_2R | 3676926..3677005 | 112..191 | 100 | -> | Plus |
arm_2R | 3677082..3677217 | 192..327 | 100 | -> | Plus |
arm_2R | 3677278..3677390 | 328..440 | 97 | | Plus |