FMO09660.5prime Sequence
1133 bp (997 high quality bases) assembled on 2010-11-05
> FMO09660.5prime
CAGTCGACATGGCTCGGTTGATGTTGCGAATGAAAGTATCCATGATACTG
ACCGGTGTATTTTTTACGCTTTACTTTGGGCTCCAGCCAGTAACAGAGTG
GTTTGAAAGAAAGGATCTAGTGACTGCACCCGAGGAAGTAGTCTTTGTGA
ACACCTCCGTGTGTCATGTAAGTGGCCAATGGAAGCCGACGGCGTTTTAC
TCTGCGATTGAGCCGGTCAACAAGTTGCGGTGTCGGATGACCCAACTACT
TACTGCAATAACTCAAGACGGTAGCAATTTTCTGGAGGCCAAAAGGATCT
CAGAGGACTTGAGTTGTAGGTATTGGCTAAAATCTGGACACACCCGCAAC
CATTCAGGGCACTACACAGCGTATGGACACTTCGATCTGAAAAGGGGTGC
GACCAGAAAAATTAAGATCGGCACTGGAGAGCAGATAGTTCGCATTAGGT
GCTCGGACAAGTTTAAAGCAAGCAAATACCATGACGTGCTTTATTTTTTG
TCTCCGCCCGATCCCAAATTGATGTCGACAGAGAGTTCTGAGAAATTGTC
TGTGATGGTCTTGGGCATTGACTCAGTTTCCCACATGCATTTTGTGCGAT
ATTTTCCCCTCGTGATGGCCTTTTTAGAAAACCACCCGCACACGAAATTC
TTCGGCTACAGTCGTGTGGGCCTGGATGCAAATGCCAATTTAGTCCCTTT
TCTAGGTGGCAAAAGCAGTCGAGCAGCTGGTTCAGACATTCTCTCCGACG
AGAAGGCGTGGCTGTGGGACAGCTTCAAGATGGAAGGCTACAGCACTGCC
TACGGTGAGGATAACGCCAAAGGGATCCTCTCCAATAGGAACGGGGATAA
AGAGCTTCCAAAAGTCCAGTTGATTTTGATTTGACTCCTGTAATTGTCGA
GATGATATTCACACGCGCTATAGCATCGATCTGAAGAGATGATCCACTGC
ACGGCAGCCCTTAAATCCAGATGTTCTCAGGACTTTGTACTCAACTGGTA
CCCTATTATGCAAGGAATGCATTTTTCTCGGTTTTCTGCAGTCGCAGTTG
TTCAGGGAGTACTATGGAAATACGCTTGCACCTGAATCTTTCTATTGATG
CTTTGAGAAGTTGCTGACCGGATATTCTGAACA
FMO09660.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1428-RA | 2031 | CG1428-RA | 65..1202 | 9..1133 | 5015 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21906353..21907418 | 9..1066 | 4645 | 97.7 | Plus |
Blast to na_te.dros performed 2014-11-26 16:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 30..116 | 669..582 | 113 | 60.2 | Minus |
FMO09660.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:31 Download gff for
FMO09660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1428-RA | 59..1201 | 1..1132 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:07 Download gff for
FMO09660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1428-RA | 59..1201 | 1..1132 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:37 Download gff for
FMO09660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1428-RA | 59..1201 | 1..1132 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:37 Download gff for
FMO09660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21906347..21907489 | 1..1132 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:07 Download gff for
FMO09660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21906347..21907489 | 1..1132 | 96 | | Plus |
