Clone FMO09683 Report

Search the DGRC for FMO09683

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:96
Well:83
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34317-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO09683.5prime Sequence

359 bp (359 high quality bases) assembled on 2010-11-05

> FMO09683.5prime
CAGTCGACATGAGTGGTTACCAATATCTGGACGTGAAGATAAAACTCCGT
GATCCAGACTCCGTGACTCTGACGCCCGTATTCTTCTGTGGCTGCATCCA
TAGCTCCTTGGCTAGTATTTTTGGCGAAATAGGTGGCCAGACCATACTGG
AAATTGTGAAATTTAGTTCCAGCCAAAAACGCTCCATTCTCCGGGTGCCC
GAGAACGTCCTGGATCGCGTTCGCGTAGCTATAGCCCTAATAGGATACTA
CCAGGAGGTGCCCTGCCATTTTCAGGTGCTCAGCACATCCCGAAAGCCCT
TGGATTTTGAGGAATCCCCCGAGGAGTTTGTAGCATTTAACGCAAGCTTT
CTAGACCAT

FMO09683.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG7950-RA 1168 CG7950-RA 144..477 8..341 1670 100 Plus
CG34317-RA 1168 CG34317-RA 144..477 8..341 1670 100 Plus
CG7950-RB 1192 CG7950-RB 201..501 41..341 1505 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30057140..30057440 41..341 1505 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:50:11 has no hits.

FMO09683.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:23 Download gff for FMO09683.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34317-RA 145..490 1..350 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:07:40 Download gff for FMO09683.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34317-RA 139..484 1..350 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:07 Download gff for FMO09683.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34317-RA 139..484 1..350 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:07 Download gff for FMO09683.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 30057140..30057447 41..350 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:07:40 Download gff for FMO09683.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25882862..25883169 41..350 98   Plus