FMO09688.5prime Sequence
886 bp (793 high quality bases) assembled on 2010-11-05
> FMO09688.5prime
CAGTCGACATGCCGGCCATCCGACCACTGAGTCCCGAGCTCCAAAAGACT
GCGATTGAGAACCTGAATGAGGTGCCTAATAAGTTGGATGACGACATCGC
CGCCCTGAGGGATTGGATTAAGCAGCAACCCCATTTGAAAGCCCGCACAG
ATGACCAGTTCTTGGTGAACTTCCTGCGCGGCTGCAAGTTCAGTTTGGAA
AGGACCAAGTCGAAGATCGACAGGTTCTACACACTACGCACCAAGTACCC
AGAGTTTTATTTGGGTCATAATGTCGATGTGGACAAAGCACTGGAGATAT
TCCGATTGGGCACCATAGTTATTCTGCCACGTCCTCTAAACGATAATGGC
CCGCGATTGGCTCTGCTGCGCATGGCCTGCTATGATCCCAGCAAATACAC
CCTCCAGGAGGTGAATCGAGCTGCTGGTCTCATGCAGCAGATTATGCTCG
ACGAGGACGATGTGGCCATTGTGAATGGTTTAATATCCATTCTGGATCTG
TCCAATGTCACCACCGGGCACTTCCTGCAGATGTCATCGTCCTTCGCCAA
GAAGATGACCGTTTTTCAGGAGGAGGCCCTGCCCCTGCGACCGCAGGGAA
TCCATTTCATTAATACGCCCAACGGATTTGACACCATCTTCAATATGATC
AAGCCCATGATGTCTAAGAAGCAGCAAGGACGCCTCTACGTTCATGGAAG
CAAATGGGAGGCACTCTACATCAGATTCCCAAACAGTATTTTGCCAGTGG
AATACGGAGGGGAGAACGGATCGATTCTGGAGCTGCTGCAGCATCGGGAG
CAGCGTATTCTAGCCTACCGGAATTACTGGGAGAGGATAAAAACTTCGGA
ACCAGGAAGCTCTCGCGAGGGTCACCTGGTTGACTT
FMO09688.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33966-RA | 1163 | CG33966-RA | 44..889 | 9..853 | 4055 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1234539..1234912 | 310..683 | 1855 | 99.7 | Plus |
| 3L | 28110227 | 3L | 1234173..1234474 | 9..310 | 1510 | 100 | Plus |
| 3L | 28110227 | 3L | 1234976..1235146 | 684..853 | 620 | 94.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:50:24 has no hits.
FMO09688.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:25 Download gff for
FMO09688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33966-RA | 36..881 | 9..853 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:07:48 Download gff for
FMO09688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33966-RA | 44..889 | 9..853 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:17 Download gff for
FMO09688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33966-RA | 44..889 | 9..853 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:17 Download gff for
FMO09688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1234173..1234474 | 9..310 | 100 | -> | Plus |
| 3L | 1234540..1234912 | 311..683 | 99 | -> | Plus |
| 3L | 1234976..1235146 | 684..853 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:07:48 Download gff for
FMO09688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1234173..1234474 | 9..310 | 100 | -> | Plus |
| arm_3L | 1234540..1234912 | 311..683 | 99 | -> | Plus |
| arm_3L | 1234976..1235146 | 684..853 | 94 | | Plus |
