FMO09691.5prime Sequence
886 bp (827 high quality bases) assembled on 2010-11-05
> FMO09691.5prime
CAGTCGACATGCCAGGATTGTGCATTGGAATCCTTCTGCTCATTGGTTTT
GGATGCACCACTGCCTACAAGATCCCCACACCGACTGTGGAGCTCCTTGA
GACTGGATTTAGCGTTTCCATACCGGATGAAGAGGGCGTAAAAGTGGTGG
CCTTTAATGTAAATCGCAATCGGAATTTCACATCCTTCATAAACGAGGGA
CAGTACAATGTGAGATTGACTGAACCCCAGAACGGCAGGTGGACGACCAA
CTTCAGTTCGGTTCCCTTGAGATCCCAAGATGTTCTATACCTTTGGACAA
GTGTGCAGCACCAAAAGGCTGTGTATCAAGATCTGGCGCAGCCCCTGCCA
GTCTGCAATCTCGGCGGAGAGTATCGGCCCAGGGGATGTTCGCCCGGTGA
TGATGACTTTACGGATGACAACCAGCTAAGTACTGAGGACAGTGCTTTGG
AACCCACCGCTCCCTCCGTCTGTGAACCTTCTGAAAGCCTGGTTTCGCCG
CAAATCGGTGTTTCCATATGTAAGGGACAACTTTTGTTTGAGGAGACTTT
TGATCAGCTGAATGAATCTCTGTGGATACATGATGTTCGCCTGCCCCTCG
ACTCCAAGGATGCAGAGTTCGTCTTGTACGACGGGAAGGCCAAAGTTCAC
GATGGCAACCTGGTGATTGAGCCGCTTCTTTGGTCCAGCTATCGCTCGGA
TCTCTCCATAGCCAACTCCAGGCTCGATCTATCGGAGCGTTGTACTGGAA
CCCATATCAGAATTAAGAATGCATCCTGCATTCCCCGGGCAGTGGACCCA
GTGGGATAATTCCCCCAATGTACACCTCGAATAACCCCAAGAAAACTTTG
TCCTTTCAATACGGAGCATTGAGATCTCCTGCTCAC
FMO09691.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GNBP1-RA | 1785 | CG6895-RA | 207..1079 | 9..876 | 4075 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18676295..18677050 | 126..876 | 3370 | 97.6 | Plus |
| 3L | 28110227 | 3L | 18676006..18676123 | 9..126 | 590 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:50:31 has no hits.
FMO09691.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:27 Download gff for
FMO09691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GNBP1-RA | 186..1073 | 1..886 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:07:52 Download gff for
FMO09691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GNBP1-RA | 199..1086 | 1..886 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:21 Download gff for
FMO09691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GNBP1-RA | 199..1086 | 1..886 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:21 Download gff for
FMO09691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18675998..18676123 | 1..126 | 96 | -> | Plus |
| 3L | 18676296..18677057 | 127..886 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:07:52 Download gff for
FMO09691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18669098..18669223 | 1..126 | 96 | -> | Plus |
| arm_3L | 18669396..18670157 | 127..886 | 97 | | Plus |
