FMO09692.5prime Sequence
803 bp (746 high quality bases) assembled on 2010-11-05
> FMO09692.5prime
CAGTCGACATGAACACACCAGTGATTTCGGTGGTGCCAAAGGAATTCAGT
CTCAGAAATCACCAATCCACCAACCCAGCCACCAGCATGAAGTTCTTCGT
TGCCACCGCCTGCATCCTGCTCCTGGCAGCAGGTATCTCTGCCGATCCCG
TCAAGGCCGCTGAGGAGCAGCCCGGCGCCTTTGCCCAGTGCCTCGAGTCC
GACTCCATCTCGTGCCTGCAGCTCACGCTCTTCCGCAAGGCCAAGTCCGT
GTTCGATAACCCTCAGATCGAGCTTTTCGGTGGTGTTTCTCTGGTGAAGT
CCAATGAAGGTCGTCAGGGCAAGTCCCTGGACAACTCCCTGGCTGTTGAG
GCCGCTCCCACCGTGGAGGCCCGCACCGCCGAGATGGGCAACTACTTCAT
GGACAACGCCAAGAGCTTCTTCGCTGAACGCTCCCTGAACTTCTACTTCG
CTAACGCCGCTCGCAGCGTGGCCCGCGCCATTCCCGATGACATCAAGGCT
GATCTCCGCGAGCTGGTTGTTGAGTCCCGTACCCGCAAGAAGAAGCTGCT
GAAGAAGTTCCTGCCCATCCTGCTGGGAGTTGGTGCTAAGATCGCCGTCC
TTGGAGACGGCTCCATCTTCGGACTACTGTTTCCTGGCCAAGAAGGCACT
GGTTGTGTCTGTTATCGCCTTCTTCCTTGGCTCTGGCTGCTGGTGCTTCC
TGCGGACTGGGACGCATCGGTGGATCCGGATGCGGCGGCGGTCTGCTCGG
TGGGCTGGGAGGTCTCTTCGGTGGCTAGAACGCCGGTGGATCGTCCGCTG
CCA
FMO09692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi6-RB | 1846 | CG1151-RB | 29..821 | 9..803 | 3790 | 98.6 | Plus |
| Osi6-RA | 1545 | CG1151-RA | 29..821 | 9..803 | 3790 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6235582..6236156 | 227..803 | 2650 | 98.1 | Plus |
| 3R | 32079331 | 3R | 6234736..6234954 | 9..227 | 1095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:50:44 has no hits.
FMO09692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:29 Download gff for
FMO09692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi6-RA | 21..819 | 1..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:08:01 Download gff for
FMO09692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi6-RA | 22..820 | 1..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:30 Download gff for
FMO09692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi6-RA | 22..820 | 1..802 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:30 Download gff for
FMO09692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6234729..6234954 | 1..227 | 99 | -> | Plus |
| 3R | 6235583..6236155 | 228..802 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:08:01 Download gff for
FMO09692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2060451..2060676 | 1..227 | 99 | -> | Plus |
| arm_3R | 2061305..2061877 | 228..802 | 98 | | Plus |
