FMO09694.5prime Sequence
1085 bp (927 high quality bases) assembled on 2010-11-05
> FMO09694.5prime
CAGTCGACATGGTCACATACAATACTCTAATACAGAACGAAAAGAATGAA
AATGTGGTCGCCCCGATAAGCCGGCCATTCGCCAGAAAGAGGAGGACTGA
GATTCGCCGCCTGCAGTCCAACAGGCGGTTGAATAAAAAGGTGTGCAAAC
ACCATTTGGACATTGCCCATTGTACCCAGAAGAAGGCTCCATGGCGGAAT
TGGGCATACCTCATTCTCGCCCTCGCCGCAGGAATTGGCATGTTATTGCA
GTTCACCGACAAGTTGTCCACGGTCAGCGGATTCCTGGAAAGCTACAAAA
ACCAGTACCACTCGATCGTCCACAACCAGGACAACTACTGCAATCCCTCC
CGACGGCTGGGCGACATGGTCCTGCACGCCCGCCACCAGGTACTCAACCA
GGATCTTGCATTGAACCAGCTAGAACTGGCACTGGACAACACCACCAATG
TGGCAATCGTCTTGGTGGGCACCTCTGGCGTAGGCAAGAGCCACACTGCG
CGAATCTTGCGCGAAACGTTTCCCTGGCCCGAGAACGTGAATACACTCTC
CTGGACCGGCAGTTCTTCTTTGGGCCGAGTGAAGAGCATGCTATCCGGCC
TGACATATTGCGGACAGAATATGATCTTGATTGATAACATGACGCCGAAG
GATGCACACTTCGTGCCTATCATTAACGAAATGATAAGTGAGGGCGAAAA
GAGCGCCAACCACACTGAGCATCCGCAACAGAAGCGGTTGACCATTGTGT
TTATCTTTAATGTGAATAGCATGCAGCCCGGCGAGGAGTTTGAGATGGAT
ATGGAGATCCTTAGAAATACGCCACACACCCAGTTGGTCACCTTTGCGAC
TCTGGATCCCACCCATCTGGTCGACTGCATTCGTAGGGAAGCGCCATCGC
AATGGTGCACCTTGAAGACGAGCACGTAGAAGAAATAATCAAAATATCGA
TGCTACGGCTTCTGGCTGCATAGTCGATTTTGGCCATGTCTCTGCTCTTT
ACGGCAACCATATATTCGCGAATCTCCAGAATACTGAACGAATTCTTTCC
GTAGTTCCTTTGCAAGCTTTCTAGACCGTCGTTTG
FMO09694.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4880-RA | 1700 | CG4880-RA | 150..1202 | 9..1061 | 4735 | 97.3 | Plus |
| CG4880-RB | 1505 | CG4880-RB | 530..1139 | 452..1061 | 2535 | 95.5 | Plus |
| CG4880-RB | 1505 | CG4880-RB | 150..531 | 9..390 | 1910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16887622..16888157 | 452..986 | 2430 | 98.1 | Plus |
| X | 23542271 | X | 16886967..16887408 | 9..450 | 2210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:50:34 has no hits.
FMO09694.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:27 Download gff for
FMO09694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4880-RA | 138..1135 | 9..1007 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:07:55 Download gff for
FMO09694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4880-RA | 150..1147 | 9..1007 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:22 Download gff for
FMO09694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4880-RA | 150..1147 | 9..1007 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:22 Download gff for
FMO09694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16886967..16887410 | 9..452 | 99 | -> | Plus |
| X | 16887623..16888176 | 453..1007 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:07:55 Download gff for
FMO09694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16781000..16781443 | 9..452 | 99 | -> | Plus |
| arm_X | 16781656..16782209 | 453..1007 | 97 | | Plus |
