FMO09695.5prime Sequence
1011 bp (793 high quality bases) assembled on 2010-11-05
> FMO09695.5prime
CAGTCGACATGATAAACAGCAAGATAAGAGAGGATAAGTTGGAAACACTT
GTCTCGCGAAGTTCTGTGCCGATCATCGATCTTGCCCATTGTGGCAAGTC
CCTTGTCCATCGGGTGGGTCAGCAACTCCACAAGGCTTTCACCGAAAAGG
GAATTGCGTTTCTGGTTAACCATGGGATAGCAGAGGACAAGATCAAAGCT
GTTTGGGATCAATTTGACAACTTCTTGGATCTGCCAGCAGAGGTTCAGGA
TCGTTACAGACGAAAGGACGGTGTTAATTATGGATATGTTAGTCCCGGGA
TGGAGCGATTTGATGGAAGTACTCCAGAACTGCGTCACGCCTACAATGTT
TGCAAACTGGATGGACAGAATATTCCAAGGGAGGCACTGCCAGAATTTGC
CGAAGGCATTACCACACTGTGCACGGATTTGAAAGCCATGTCTTTGTATA
TAATGAAGGCCATGGAGGTGGCCCTGGAGATTCCGCCGTCCTTCTTCATC
GACAAACACTCCCAGATGTTGGAAGGAGATGACCTAAACATGACCACCCT
CAGGATGCTCTACTATCCGGCGATTGTGGATGATGAGCCGGGCCAGAGCG
AGGGTGCCATCCGTTGTGGTGCCCATGTGGACTACGGCACCTTCACGCTG
CTCGCCCAGGATTCCGAAGGTGGCTTGGAGGTGCAATTGTCGGGCAGCGA
AAAATGGGAACGGGTGGGTCATTTACCTGGTGCCATACTTATAAACGGCG
GGGAACTTCTGTCCATCTGGACGAAGCAGCGTTACCACGCCCTGCCCTCA
TCGCGTCGTCATACCTGAACAAAAATTTATAAAAACCCGGGGTGACACTC
CATAGCTAATTTCCTGCCATCCCCATAATACCGATCTTGATATTTCCCCC
GATTTGTTGATGAAGGGGAGGCCAATAATGGAGAAAAATAATTACTCGCC
CTCTAAACTGTTAAGAAAAAATTTTATGAGACCTACCGTCGAGGTTTTTA
CCAGCTTTTCT
FMO09695.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33099-RA | 1248 | CG33099-RA | 121..1102 | 9..990 | 4205 | 95.7 | Plus |
| CG5346-RA | 1921 | CG5346-RA | 796..1093 | 304..601 | 230 | 72.2 | Plus |
| CG5346-RA | 1921 | CG5346-RA | 1269..1360 | 627..718 | 190 | 80.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22529385..22529989 | 794..190 | 2995 | 99.7 | Minus |
| 3R | 32079331 | 3R | 22530039..22530137 | 191..93 | 495 | 100 | Minus |
| 3R | 32079331 | 3R | 22530362..22530452 | 99..9 | 425 | 97.8 | Minus |
| 3R | 32079331 | 3R | 22521378..22521675 | 601..304 | 215 | 71.5 | Minus |
| 3R | 32079331 | 3R | 22529221..22529322 | 898..796 | 205 | 86.5 | Minus |
| 3R | 32079331 | 3R | 22521111..22521202 | 718..627 | 190 | 80.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:50:37 has no hits.
FMO09695.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:28 Download gff for
FMO09695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33099-RA | 99..1027 | 1..933 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:07:56 Download gff for
FMO09695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33099-RA | 116..1044 | 1..933 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:25 Download gff for
FMO09695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33099-RA | 116..1044 | 1..933 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:25 Download gff for
FMO09695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22529385..22529987 | 192..794 | 99 | <- | Minus |
| 3R | 22530039..22530136 | 94..191 | 100 | <- | Minus |
| 3R | 22530368..22530457 | 1..93 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:07:56 Download gff for
FMO09695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18355107..18355709 | 192..794 | 99 | <- | Minus |
| arm_3R | 18355761..18355858 | 94..191 | 100 | <- | Minus |
| arm_3R | 18356090..18356179 | 1..93 | 94 | | Minus |
