FMO09696.3prime Sequence
648 bp (-448 high quality bases) assembled on 2010-11-05
> FMO09696.3prime
GTTCGTTGGTGGTATATCCTTTTCGTTGAAAAACAGCAAAGAAGGACATC
ATCTGAATTAGATAATACCTAAGCTTGAGCCAGGTTTGAGATTAGGTTTT
CCCAGGAATTCCAGCTGAACCAAGTTGATTTAAGTGCCGCCTTGAGCATC
ACTTATACATTTCAACTGGAATTTCAGTGGAAGAATAATAGTTCGGATCT
CGTGACATATCGTACGGAGTTTCGTTATGTACTCTTTAGGAGAAGAATGG
TGACTGTGCTTTAACTGTGTTGTAAGAAAGTAAGAAAATCGCTCAGAACT
GAATCCATAAACATAGTTGACAAAATATGTTTCACGTGCGTATGAGTTTA
TAAAAGTTCTCGTTCCAGTTGTAACTGCCGAGGAAGCAATCTGAAACATT
TTAGTCTTTTCGAGGGAGCGGGATGCAACTGCGGGAATTTCACTGCGGTA
CGGTGAATTATTTGTGTATGTAACTCCGACGTACATCACATTAGTCACCG
GATGTTGTGGAGGTCCCGGCGCAATAAAAGCTACGGTTGAGGAGTTGGCA
TCATTAGCCACAACAGCATCAGGAACTTCATGCTCAATTATGCTGACATT
TTGAAGATTACGAACTGTGCATGTACCTTGAAATAGTGATCCACACGC
FMO09696.3prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PlexA-RF | 10243 | CG11081-RF | 992..1639 | 648..1 | 2650 | 95.1 | Minus |
| PlexA-RA | 6592 | CG11081-RA | 799..1446 | 648..1 | 2650 | 95.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 1022404..1023021 | 29..648 | 2435 | 95 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:50:40 has no hits.
FMO09696.3prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:12:28 Download gff for
FMO09696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| plexA-RD | 915..1541 | 17..648 | 95 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:07:59 Download gff for
FMO09696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| plexA-RA | 799..1425 | 17..648 | 95 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:27 Download gff for
FMO09696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PlexA-RA | 799..1425 | 17..648 | 95 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:38:27 Download gff for
FMO09696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 1022395..1023021 | 17..648 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:07:59 Download gff for
FMO09696.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 1043021..1043647 | 17..648 | 95 | | Plus |
