FMO09701.5prime Sequence
752 bp (752 high quality bases) assembled on 2010-10-20
> FMO09701.5prime
CAGTCGACATGGATCGGAGAGTGACTGCGATTGGTTTGGTTATCCTGCAG
CTGCTGGTCAGCGGCCTCTGTTTCCAGGAGAAGGCGCCACTGCAGACGAG
CCTGGTCAGCGGACAGGCCAGGACCGAAAAGCAGCAACAGGTGCTGGACG
ATCCGCTGGGAAGTGGACGCGGGATTGACGAGCACCTGCTGAAGACCATT
GGTAAGGGCGGCATCAAGCTGGTGATGGCCTCGGGAGCCCCGTCGACCAC
CCCGAAACCGTCAGTACAACACCATTACTATTATCCACCAGAGGATCAGC
AGCACCCACGGCAGTATGGCTATCCACCGCAGTGGTCGCCAGGACCGCCC
GCTTATCCGCCGCCACCGCAGCGTCCTTGGGGGCCACCCCCTCCGCCCGG
ACCACCGCCGCCAGGACCTCCTCCTCCGCCGGGACCCTACTACAATCCCT
ACTACAATGGCTACAACTACTACGGCGGATATGGCGGCTATGGATATGGG
GGCTTTGGATATCCCGGCTTTGGCGGCTATTCTGGCTATCCCTACTATCC
CTTCTATCGCTCCTCGACGGCTGGCGAGGTCGATAACCAACTTCCCGGTG
CCGATGGACTCACTTCCGCCGCCATTCCTGGCGTTTTCCAGGGCAGGGCC
GTGCTGTCCCACCAGAACTTCCTCGACGGCAGGAACAACGCTAACGTTGT
GCCACTTTATCACCTACTCCAAATGGCCAGGGCTGCAAGCTTTCTAGACC
AT
FMO09701.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9184-RA | 966 | CG9184-RA | 24..750 | 8..734 | 3635 | 100 | Plus |
| CG9184-RB | 876 | CG9184-RB | 217..660 | 291..734 | 2220 | 100 | Plus |
| CG9184-RB | 876 | CG9184-RB | 24..217 | 8..201 | 970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:50:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1322008..1322703 | 734..39 | 3480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:50:30 has no hits.
FMO09701.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 12:01:19 Download gff for
FMO09701.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9184-RA | 13..758 | 1..746 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:44:58 Download gff for
FMO09701.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9184-RA | 17..762 | 1..746 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:56 Download gff for
FMO09701.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9184-RA | 17..762 | 1..746 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:56 Download gff for
FMO09701.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1321996..1322702 | 40..746 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:44:58 Download gff for
FMO09701.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1321996..1322702 | 40..746 | 99 | <- | Minus |
